RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 DHX8Q14562 1220 aaKnown RBP11.6□□□□□ -0.55
LTN1-203ENST00000389195 STX1AQ16623 288 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 CCDC144BQ3MJ40 725 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 SLC30A10Q6XR72 485 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 CEP350Q5VT06 3117 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 A0A1W2PRG0 241 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 CUTAO60888 179 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 TTLL1O95922 423 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 PRELPP51888 382 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 KARSQ15046 597 aaKnown RBP11.6□□□□□ -0.55
LTN1-203ENST00000389195 USH1GQ495M9 461 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 KIAA1755Q5JYT7 1200 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 KLHL10Q6JEL2 608 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 SAMD7Q7Z3H4 446 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 ZNF287Q9HBT7 754 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 PCDHA4Q9UN74 947 aa11.6□□□□□ -0.55
LTN1-203ENST00000389195 CCDC194A0A1B0GVG4 234 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L15C9J2P7 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L13C9JLJ4 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L11C9JVI0 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L18D6R9N7 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L22D6RA61 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L17D6RBQ6 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L19D6RCP7 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L20D6RJB6 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 RCAN1P53805 252 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 GOLGA8FQ08AF8 430 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 GOLGA8DPQ0D2H9 430 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L24Q0WX57 530 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 IKQ13123 557 aaPredicted RBP11.59□□□□□ -0.55
LTN1-203ENST00000389195 CCDC93Q567U6 631 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 USP17L6PQ6QN14 398 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 FILIP1Q7Z7B0 1213 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 JMYQ8N9B5 988 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 ACER1Q8TDN7 264 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 ANKS1AQ92625 1134 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 TRIM34Q9BYJ4 488 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 KCNF1Q9H3M0 494 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 JMJD4Q9H9V9 463 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 BRMS1Q9HCU9 246 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 BARHL2Q9NY43 387 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 SRPRBQ9Y5M8 271 aaKnown RBP11.59□□□□□ -0.55
LTN1-203ENST00000389195 GJA3Q9Y6H8 435 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 GOLGA6L19H0YKK7 550 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 CCNT1O60563 726 aaKnown RBP11.59□□□□□ -0.55
LTN1-203ENST00000389195 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
LTN1-203ENST00000389195 STX17P56962 302 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 PPP2R5BQ15173 497 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 CCDC186Q7Z3E2 898 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 ZSCAN30Q86W11 494 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 LRRC15Q8TF66 581 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 PI4KBQ9UBF8 816 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 RSBN1LQ6PCB5 846 aaPredicted RBP11.59□□□□□ -0.55
LTN1-203ENST00000389195 RRP36Q96EU6 259 aaKnown RBP11.59□□□□□ -0.55
LTN1-203ENST00000389195 SEC63Q9UGP8 760 aaKnown RBP11.59□□□□□ -0.55
LTN1-203ENST00000389195 PYCARDQ9ULZ3 195 aa11.59□□□□□ -0.55
LTN1-203ENST00000389195 DNAH12Q6ZR08 3092 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 MDM2Q00987 491 aaPredicted RBP11.58□□□□□ -0.56
LTN1-203ENST00000389195 DLGAP5Q15398 846 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 CREBRFQ8IUR6 639 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 MTRQ99707 1265 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 IGKV6D-41A0A0C4DH26 115 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 SLC1A4P43007 532 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 FMR1Q06787 632 aaKnown RBP eCLIP11.58□□□□□ -0.56
LTN1-203ENST00000389195 OGFOD1Q8N543 542 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 DPF2Q92785 391 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 ANO10Q9NW15 660 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 PIM2Q9P1W9 311 aa11.58□□□□□ -0.56
LTN1-203ENST00000389195 DLEC1Q9Y238 1755 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 M0R2N6 131 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 ACTN4O43707 911 aaKnown RBP11.57□□□□□ -0.56
LTN1-203ENST00000389195 EDIL3O43854 480 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 TDP2O95551 362 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 TECP42680 631 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 TNNI2P48788 182 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 ICA1Q05084 483 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 UVSSAQ2YD98 709 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 TBC1D10BQ4KMP7 808 aaPredicted RBP11.57□□□□□ -0.56
LTN1-203ENST00000389195 MED15Q96RN5 788 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 SUGT1Q9Y2Z0 365 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 NFKBIEO00221 500 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 CTAGE5O15320 804 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 ZNF75DP51815 510 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 POSTNQ15063 836 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 ABCB5Q2M3G0 1257 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 C4orf32Q8N8J7 132 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 RASSF8Q8NHQ8 419 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.57□□□□□ -0.56
LTN1-203ENST00000389195 FAM13BQ9NYF5 915 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 ZNF70Q9UC06 446 aaPredicted RBP11.57□□□□□ -0.56
LTN1-203ENST00000389195 MAN1B1Q9UKM7 699 aa11.57□□□□□ -0.56
LTN1-203ENST00000389195 NOL7Q9UMY1 257 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms