RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 MAN1A1P33908 653 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 NLRP12P59046 1061 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 ZNF569Q5MCW4 686 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 RC3H1Q5TC82 1133 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 CCDC186Q7Z3E2 898 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 FANCBQ8NB91 859 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 GTF3C2Q8WUA4 911 aaPredicted RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 LARP6Q9BRS8 491 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 MTA3Q9BTC8 594 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 MTIF3Q9H2K0 278 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 BZW2Q9Y6E2 419 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 MAGI3Q5TCQ9 1506 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 KLRF2D3W0D1 207 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 NOL3O60936 208 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 KRT19P08727 400 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 CCND2P30279 289 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 GABPAQ06546 454 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 ISM2Q6H9L7 571 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 APOBEC3FQ8IUX4 373 aaKnown RBP7.91□□□□□ -1.14
CCDC171-201ENST00000380701 ARHGAP24Q8N264 748 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 TTC1Q99614 292 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 PLCB1Q9NQ66 1216 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 STK17AQ9UEE5 414 aa7.91□□□□□ -1.14
CCDC171-201ENST00000380701 ERVK-7P63135 1459 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 USP6P35125 1406 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 ZSCAN20P17040 1043 aaPredicted RBP7.9□□□□□ -1.14
CCDC171-201ENST00000380701 PTGS1P23219 599 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 G2E3Q7L622 706 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 IFT20Q8IY31 132 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 VPS52Q8N1B4 723 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 CTNND2Q9UQB3 1225 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 USP17L3A6NCW0 530 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 USP17L4A6NCW7 530 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 POLGP54098 1239 aaPredicted RBP7.9□□□□□ -1.14
CCDC171-201ENST00000380701 KLHL30Q0D2K2 578 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 USH1GQ495M9 461 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 USP17L1Q7RTZ2 530 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 TRIM50Q86XT4 487 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 SEPT12Q8IYM1 358 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 TTC16Q8NEE8 873 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 GCNAQ96QF7 691 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 RNF26Q9BY78 433 aaPredicted RBP7.9□□□□□ -1.14
CCDC171-201ENST00000380701 GUCA1BQ9UMX6 200 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 SNX14Q9Y5W7 946 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 E7EWF7 191 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 ASNSP08243 561 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 KIAA0825Q8IV33 1275 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 NAPGQ99747 312 aaPredicted RBP7.9□□□□□ -1.14
CCDC171-201ENST00000380701 RAB17Q9H0T7 212 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 JAG2Q9Y219 1238 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 SPATA31A6Q5VVP1 1343 aa7.9□□□□□ -1.14
CCDC171-201ENST00000380701 CAPN9O14815 690 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 LMNB2Q03252 620 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 RASA3Q14644 834 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 GBP6Q6ZN66 633 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 KRT222Q8N1A0 295 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 SECISBP2LQ93073 1101 aaKnown RBP7.9□□□□□ -1.15
CCDC171-201ENST00000380701 EXOC4Q96A65 974 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 SLC10A4Q96EP9 437 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 TMEM206Q9H813 350 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 ARMCX3Q9UH62 379 aaPredicted RBP7.9□□□□□ -1.15
CCDC171-201ENST00000380701 SERPINB13Q9UIV8 391 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 NUB1Q9Y5A7 615 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 MYO5CQ9NQX4 1742 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 ZMYM4Q5VZL5 1548 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 ERBB3P21860 1342 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 GRIN3BO60391 1043 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 PRDM1O75626 825 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 ZWINTO95229 277 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 PSMC4P43686 418 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 TPH2Q8IWU9 490 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 FAM178BQ8IXR5 827 aa7.9□□□□□ -1.15
CCDC171-201ENST00000380701 ARHGAP6O43182 974 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 SRGAP2BP0DMP2 458 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 GPBP1Q86WP2 473 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 TTC39CQ8N584 583 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 ZNF594Q96JF6 807 aaPredicted RBP7.89□□□□□ -1.15
CCDC171-201ENST00000380701 MED10Q9BTT4 135 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 IFNKQ9P0W0 207 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 GOLGA8QA0A0J9YX86 632 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 GOLGA8OA6NCC3 632 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 TCP10L2B9ZVM9 353 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 TMEM232C9JQI7 657 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 GOLGA8NF8WBI6 632 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 EIF3DO15371 548 aaKnown RBP eCLIP7.89□□□□□ -1.15
CCDC171-201ENST00000380701 GTPBP6O43824 516 aaPredicted RBP7.89□□□□□ -1.15
CCDC171-201ENST00000380701 CIB2O75838 187 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 MAGEA1P43355 309 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 STX17P56962 302 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 ORC2Q13416 577 aaPredicted RBP7.89□□□□□ -1.15
CCDC171-201ENST00000380701 BEND3Q5T5X7 828 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 PODNQ7Z5L7 613 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 NOSTRINQ8IVI9 506 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 EFCAB13Q8IY85 973 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 METTL13Q8N6R0 699 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 JCADQ9P266 1359 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 PHBP35232 272 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 PRKG1Q13976 671 aa7.89□□□□□ -1.15
CCDC171-201ENST00000380701 TCP11Q8WWU5 503 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms