RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 hCG_2014768A0A024R1R8 64 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 KIF28PB7ZC32 967 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 FNTAP49354 379 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 MAGOHP61326 146 aaKnown RBP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 FAM114A1Q8IWE2 563 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 HDAC7Q8WUI4 952 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 MAGOHBQ96A72 148 aaKnown RBP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
USP6NL-202ENST00000379237 SCOCQ9UIL1 159 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 KCNJ14Q9UNX9 436 aa12.1□□□□□ -0.47
USP6NL-202ENST00000379237 ERVK-24P63145 666 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 RILPL1Q5EBL4 403 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 LONP2Q86WA8 852 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 MYL10Q9BUA6 226 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 RGL1Q9NZL6 768 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 H0Y3Z8 333 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 MTMR3Q13615 1198 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 SETDB1Q15047 1291 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 GLE1Q53GS7 698 aaKnown RBP12.09□□□□□ -0.47
USP6NL-202ENST00000379237 SOGA3Q5TF21 947 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 SMCR8Q8TEV9 937 aaPredicted RBP12.09□□□□□ -0.47
USP6NL-202ENST00000379237 ZCWPW1Q9H0M4 648 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 INTS9Q9NV88 658 aaKnown RBP12.09□□□□□ -0.47
USP6NL-202ENST00000379237 IQGAP1P46940 1657 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 ANO9A1A5B4 782 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 AGPSO00116 658 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 PSMD14O00487 310 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 RASSF9O75901 435 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 PPP2R2AP63151 447 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 PPP4R3AQ6IN85 833 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 ARHGAP22Q7Z5H3 698 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 TSEN2Q8NCE0 465 aaKnown RBP12.09□□□□□ -0.47
USP6NL-202ENST00000379237 KCNB2Q92953 911 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 BTBD18B2RXH4 712 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 CEP104O60308 925 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
USP6NL-202ENST00000379237 PTPROQ16827 1216 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 OR2W6PQ8NHA6 318 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
USP6NL-202ENST00000379237 ADGRB2O60241 1585 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 CFAP73A6NFT4 308 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 CDK5RAP3Q96JB5 506 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 VCX3BQ9H321 246 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 VCX3AQ9NNX9 186 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 AATFQ9NY61 560 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 UHMK1Q8TAS1 419 aaKnown RBP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 ABTB1Q969K4 478 aaPredicted RBP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 CHMP6Q96FZ7 201 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 FGD4Q96M96 766 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 NOC4LQ9BVI4 516 aaKnown RBP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 NHEJ1Q9H9Q4 299 aaPredicted RBP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 CWC25Q9NXE8 425 aaPredicted RBP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 ADD3Q9UEY8 706 aaKnown RBP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 TTC26A0AVF1 554 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 UPP2O95045 317 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 DYNC1I2Q13409 638 aaKnown RBP12.08□□□□□ -0.48
USP6NL-202ENST00000379237 PSMD1Q99460 953 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 MYD88Q99836 296 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 SH3GL2Q99962 352 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 ARHGEF5Q12774 1597 aa12.08□□□□□ -0.48
USP6NL-202ENST00000379237 RAPGEF3O95398 923 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 PYGLP06737 847 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 ELF3P78545 371 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 SEPT2Q15019 361 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 MFN1Q8IWA4 741 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 KIF2BQ8N4N8 673 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 GRIN2DO15399 1336 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 PBRM1Q86U86 1689 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 CCT8L1PA6NM43 557 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 RGS16O15492 202 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 NCK2O43639 380 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 TPP2P29144 1249 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 GRIK3Q13003 919 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 KBTBD3Q8NAB2 608 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 RAB3IPQ96QF0 476 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 DPH5Q9H2P9 285 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 MLXIPQ9HAP2 919 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 SLC39A2Q9NP94 309 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 FAM207AQ9NSI2 230 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 EHD2Q9NZN4 543 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 MMEP08473 750 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 CCND1P24385 295 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 IFI16Q16666 785 aaKnown RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 ARHGEF2Q92974 986 aaKnown RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 SUCLG2Q96I99 432 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 HSPD1P10809 573 aaKnown RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 DESP17661 470 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 STAT6P42226 847 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 NLRP6P59044 892 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 TMEM154Q6P9G4 183 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
USP6NL-202ENST00000379237 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 NOSTRINQ8IVI9 506 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 NUP58Q9BVL2 599 aa12.07□□□□□ -0.48
USP6NL-202ENST00000379237 TAF1DQ9H5J8 278 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms