RNA–Protein interactions for RNA: ENST00000375130.2

NCBP1-201, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-201ENST00000375130 TXNDC11Q6PKC3 985 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 DTHD1Q6ZMT9 781 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 CHSY3Q70JA7 882 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 KRT27Q7Z3Y8 459 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 TTC30BQ8N4P2 665 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 IL22RA1Q8N6P7 574 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 ZNF417Q8TAU3 575 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 DHX38Q92620 1227 aaKnown RBP4.89□□□□□ -1.63
NCBP1-201ENST00000375130 GOLGA1Q92805 767 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 ZNF587Q96SQ5 575 aaPredicted RBP4.89□□□□□ -1.63
NCBP1-201ENST00000375130 APBA2Q99767 749 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 TRIM56Q9BRZ2 755 aaKnown RBP4.89□□□□□ -1.63
NCBP1-201ENST00000375130 PIF1Q9H611 641 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 ZSWIM4Q9H7M6 989 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 JPH1Q9HDC5 661 aaPredicted RBP4.89□□□□□ -1.63
NCBP1-201ENST00000375130 GDF2Q9UK05 429 aaPredicted RBP4.89□□□□□ -1.63
NCBP1-201ENST00000375130 LZTS1Q9Y250 596 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 USP31Q70CQ4 1352 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 TNS3Q68CZ2 1445 aa4.89□□□□□ -1.63
NCBP1-201ENST00000375130 CCDC163A0A0D9SF12 145 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 LINC01387J3KSC0 135 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 SOX1O00570 391 aaPredicted RBP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 GIPC1O14908 333 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 SMNDC1O75940 238 aaKnown RBP eCLIP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 LDHAP00338 332 aaKnown RBP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 HOXB4P17483 251 aaPredicted RBP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 EPHA1P21709 976 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 EIF5P55010 431 aaKnown RBP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 RAPGEF1Q13905 1077 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 COL9A3Q14050 684 aaPredicted RBP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 TAF1CQ15572 869 aaPredicted RBP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 PCSK7Q16549 785 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 MAP3K11Q16584 847 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 MAP9Q49MG5 647 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 TTLL5Q6EMB2 1281 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 TPTE2Q6XPS3 522 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 SLCO4C1Q6ZQN7 724 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 VN1R5Q7Z5H4 357 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 FILIP1Q7Z7B0 1213 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 DMRTC2Q8IXT2 367 aaPredicted RBP4.88□□□□□ -1.63
NCBP1-201ENST00000375130 PAF1Q8N7H5 531 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 CCDC89Q8N998 374 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 FRS2Q8WU20 508 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 STAG1Q8WVM7 1258 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 GMLQ99445 158 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 SEZ6LQ9BYH1 1024 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 RBSNQ9H1K0 784 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 COPRSQ9NQ92 184 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 FAM8A1Q9UBU6 413 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 PRKAB1Q9Y478 270 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 KIF1AQ12756 1690 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 PLCH1Q4KWH8 1693 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 SBNO1A3KN83 1393 aa4.88□□□□□ -1.63
NCBP1-201ENST00000375130 RGPD1P0DJD0 1748 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 NRAPQ86VF7 1730 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 ABCA3Q99758 1704 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 TNS1Q9HBL0 1735 aaKnown RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 FMN2Q9NZ56 1722 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 KIF1CO43896 1103 aaKnown RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 CAND2O75155 1236 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 COQ9O75208 318 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 MTA2O94776 668 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 PDGFRBP09619 1106 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 FAM163BP0C2L3 166 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 AMPD1P23109 780 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 GTF2F1P35269 517 aaKnown RBP eCLIP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 TNNT2P45379 298 aaPredicted RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 SNRPNP63162 240 aaKnown RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 HLTFQ14527 1009 aaKnown RBP eCLIP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 BMS1Q14692 1282 aaKnown RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 CC2D1AQ6P1N0 951 aaPredicted RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 PODNQ7Z5L7 613 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 LCA5Q86VQ0 697 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 SMAP1Q8IYB5 467 aaPredicted RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 JDP2Q8WYK2 163 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 CCDC47Q96A33 483 aaKnown RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 SRRTQ9BXP5 876 aaKnown RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 BHLHE41Q9C0J9 482 aaPredicted RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 ADAM19Q9H013 955 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 CXorf56Q9H5V9 222 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 SUDS3Q9H7L9 328 aaPredicted RBP4.87□□□□□ -1.63
NCBP1-201ENST00000375130 SEC31BQ9NQW1 1179 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 TRAK1Q9UPV9 953 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 CNTNAP5Q8WYK1 1306 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 ABCC11Q96J66 1382 aa4.87□□□□□ -1.63
NCBP1-201ENST00000375130 THSD7AQ9UPZ6 1657 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 KNDC1Q76NI1 1749 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 PPLO60437 1756 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 KIF1BO60333 1816 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 GOLGA6L3A6NEY3 463 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 MINDY4BA8MYZ0 360 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 IPO8O15397 1037 aaKnown RBP4.86□□□□□ -1.63
NCBP1-201ENST00000375130 PAGE1O75459 146 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 FOSP01100 380 aaPredicted RBP4.86□□□□□ -1.63
NCBP1-201ENST00000375130 HNRNPCP07910 306 aaKnown RBP eCLIP4.86□□□□□ -1.63
NCBP1-201ENST00000375130 KCNA2P16389 499 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 ITPKAP23677 461 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 CDC27P30260 824 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 GSTT1P30711 240 aa4.86□□□□□ -1.63
NCBP1-201ENST00000375130 CLK1P49759 484 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms