RNA–Protein interactions for RNA: ENST00000375130.2

NCBP1-201, Transcript of nuclear cap binding protein subunit 1, humanhuman

TSL 3

Gene NCBP1, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-201ENST00000375130 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
NCBP1-201ENST00000375130 POTEDQ86YR6 584 aa15.79■□□□□ 0.12
NCBP1-201ENST00000375130 CHIC1Q5VXU3 224 aa15.76■□□□□ 0.11
NCBP1-201ENST00000375130 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
NCBP1-201ENST00000375130 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
NCBP1-201ENST00000375130 FOXD1Q16676 465 aa13.77□□□□□ -0.21
NCBP1-201ENST00000375130 MSH5O43196 834 aa13.55□□□□□ -0.24
NCBP1-201ENST00000375130 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
NCBP1-201ENST00000375130 PIAS4Q8N2W9 510 aaPredicted RBP12.59□□□□□ -0.39
NCBP1-201ENST00000375130 POTEHQ6S545 545 aa12.11□□□□□ -0.47
NCBP1-201ENST00000375130 PPP6R1Q9UPN7 881 aa11.67□□□□□ -0.54
NCBP1-201ENST00000375130 ADRA2BP18089 450 aa11.6□□□□□ -0.55
NCBP1-201ENST00000375130 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
NCBP1-201ENST00000375130 DMRT2Q9Y5R5 561 aa11.32□□□□□ -0.6
NCBP1-201ENST00000375130 PLPPR3Q6T4P5 718 aa11.31□□□□□ -0.6
NCBP1-201ENST00000375130 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
NCBP1-201ENST00000375130 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
NCBP1-201ENST00000375130 MAPK8IP2Q13387 824 aaPredicted RBP11.11□□□□□ -0.63
NCBP1-201ENST00000375130 PLSCR2Q9NRY7 297 aa10.77□□□□□ -0.69
NCBP1-201ENST00000375130 SCAF1Q9H7N4 1312 aaKnown RBP10.7□□□□□ -0.7
NCBP1-201ENST00000375130 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
NCBP1-201ENST00000375130 HOXD11P31277 338 aaPredicted RBP10.27□□□□□ -0.77
NCBP1-201ENST00000375130 DNAJC5BQ9UF47 199 aa10.19□□□□□ -0.78
NCBP1-201ENST00000375130 CHRDL2Q6WN34 429 aa10.15□□□□□ -0.78
NCBP1-201ENST00000375130 DSG3P32926 999 aa10.13□□□□□ -0.79
NCBP1-201ENST00000375130 KCNA4P22459 653 aa10.11□□□□□ -0.79
NCBP1-201ENST00000375130 PPP4R3CPQ6ZMV5 832 aa10.07□□□□□ -0.8
NCBP1-201ENST00000375130 LHX8Q68G74 356 aa9.97□□□□□ -0.81
NCBP1-201ENST00000375130 CAPN15O75808 1086 aa9.95□□□□□ -0.82
NCBP1-201ENST00000375130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.94□□□□□ -0.82
NCBP1-201ENST00000375130 HAX1O00165 279 aa9.9□□□□□ -0.82
NCBP1-201ENST00000375130 RNF216Q9NWF9 866 aaPredicted RBP9.82□□□□□ -0.84
NCBP1-201ENST00000375130 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
NCBP1-201ENST00000375130 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
NCBP1-201ENST00000375130 NCBP3Q53F19 620 aaKnown RBP9.75□□□□□ -0.85
NCBP1-201ENST00000375130 NPM3O75607 178 aaKnown RBP9.72□□□□□ -0.85
NCBP1-201ENST00000375130 CNKSR2Q8WXI2 1034 aa9.68□□□□□ -0.86
NCBP1-201ENST00000375130 EHMT2Q96KQ7 1210 aa9.63□□□□□ -0.87
NCBP1-201ENST00000375130 SLC4A1APQ9BWU0 796 aaKnown RBP9.6□□□□□ -0.87
NCBP1-201ENST00000375130 ABCB7O75027 752 aa9.56□□□□□ -0.88
NCBP1-201ENST00000375130 PIP4P2Q8N4L2 257 aa9.55□□□□□ -0.88
NCBP1-201ENST00000375130 EVX2Q03828 476 aa9.52□□□□□ -0.89
NCBP1-201ENST00000375130 POTEMA6NI47 508 aa9.49□□□□□ -0.89
NCBP1-201ENST00000375130 U3KPZ7 1027 aaPredicted RBP9.44□□□□□ -0.9
NCBP1-201ENST00000375130 CSRNP3Q8WYN3 585 aa9.43□□□□□ -0.9
NCBP1-201ENST00000375130 TRHP20396 242 aaPredicted RBP9.42□□□□□ -0.9
NCBP1-201ENST00000375130 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
NCBP1-201ENST00000375130 PCDH10Q9P2E7 1040 aa9.4□□□□□ -0.9
NCBP1-201ENST00000375130 ZBTB22O15209 634 aa9.33□□□□□ -0.92
NCBP1-201ENST00000375130 ZNF219Q9P2Y4 722 aaPredicted RBP9.3□□□□□ -0.92
NCBP1-201ENST00000375130 GABBR2O75899 941 aa9.27□□□□□ -0.93
NCBP1-201ENST00000375130 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
NCBP1-201ENST00000375130 AKT1S1Q96B36 256 aa9.2□□□□□ -0.94
NCBP1-201ENST00000375130 SLC4A2P04920 1241 aa9.17□□□□□ -0.94
NCBP1-201ENST00000375130 APLP2Q06481 763 aa9.15□□□□□ -0.94
NCBP1-201ENST00000375130 FOXD4L1Q9NU39 408 aa9.14□□□□□ -0.95
NCBP1-201ENST00000375130 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
NCBP1-201ENST00000375130 PITPNM1O00562 1244 aa9.03□□□□□ -0.96
NCBP1-201ENST00000375130 POTEIP0CG38 1075 aa8.99□□□□□ -0.97
NCBP1-201ENST00000375130 OTUD5Q96G74 571 aa8.99□□□□□ -0.97
NCBP1-201ENST00000375130 C19orf67A6NJJ6 358 aa8.98□□□□□ -0.97
NCBP1-201ENST00000375130 MYCNP04198 464 aaPredicted RBP8.88□□□□□ -0.99
NCBP1-201ENST00000375130 PRKAR2AP13861 404 aaKnown RBP8.83□□□□□ -1
NCBP1-201ENST00000375130 ATF5Q9Y2D1 282 aaPredicted RBP8.82□□□□□ -1
NCBP1-201ENST00000375130 DCBLD2Q96PD2 775 aa8.8□□□□□ -1
NCBP1-201ENST00000375130 POLA2Q14181 598 aa8.76□□□□□ -1.01
NCBP1-201ENST00000375130 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.74□□□□□ -1.01
NCBP1-201ENST00000375130 ATXN8OSP0DMR3 200 aa8.74□□□□□ -1.01
NCBP1-201ENST00000375130 HNRNPUL2Q1KMD3 747 aaKnown RBP8.74□□□□□ -1.01
NCBP1-201ENST00000375130 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
NCBP1-201ENST00000375130 CDAN1Q8IWY9 1227 aa8.7□□□□□ -1.02
NCBP1-201ENST00000375130 POTEB2H3BUK9 544 aa8.67□□□□□ -1.02
NCBP1-201ENST00000375130 SAMD1Q6SPF0 538 aaPredicted RBP8.66□□□□□ -1.02
NCBP1-201ENST00000375130 MMRN1Q13201 1228 aa8.65□□□□□ -1.02
NCBP1-201ENST00000375130 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
NCBP1-201ENST00000375130 CLCN6P51797 869 aa8.6□□□□□ -1.03
NCBP1-201ENST00000375130 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
NCBP1-201ENST00000375130 SPNS2Q8IVW8 549 aa8.49□□□□□ -1.05
NCBP1-201ENST00000375130 FKBP8Q14318 412 aa8.48□□□□□ -1.05
NCBP1-201ENST00000375130 ZBTB12Q9Y330 459 aaPredicted RBP8.48□□□□□ -1.05
NCBP1-201ENST00000375130 CLEC11AQ9Y240 323 aa8.47□□□□□ -1.05
NCBP1-201ENST00000375130 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
NCBP1-201ENST00000375130 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
NCBP1-201ENST00000375130 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
NCBP1-201ENST00000375130 MKRN4PQ13434 485 aaPredicted RBP8.39□□□□□ -1.07
NCBP1-201ENST00000375130 SPDYE1Q8NFV5 336 aaPredicted RBP8.33□□□□□ -1.08
NCBP1-201ENST00000375130 SCUBE2Q9NQ36 999 aa8.32□□□□□ -1.08
NCBP1-201ENST00000375130 NISCHQ9Y2I1 1504 aa8.29□□□□□ -1.08
NCBP1-201ENST00000375130 POTEJP0CG39 1038 aa8.26□□□□□ -1.09
NCBP1-201ENST00000375130 FBLN2P98095 1184 aa8.25□□□□□ -1.09
NCBP1-201ENST00000375130 SPDYE4A6NLX3 237 aa8.24□□□□□ -1.09
NCBP1-201ENST00000375130 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
NCBP1-201ENST00000375130 METRNQ9UJH8 293 aa8.2□□□□□ -1.1
NCBP1-201ENST00000375130 ZNF579Q8NAF0 562 aaKnown RBP8.19□□□□□ -1.1
NCBP1-201ENST00000375130 PELP1Q8IZL8 1130 aaKnown RBP8.16□□□□□ -1.1
NCBP1-201ENST00000375130 SLC24A1O60721 1099 aa8.14□□□□□ -1.11
NCBP1-201ENST00000375130 ZRANB1Q9UGI0 708 aa8.12□□□□□ -1.11
NCBP1-201ENST00000375130 C7P10643 843 aa8.1□□□□□ -1.11
NCBP1-201ENST00000375130 SLC39A7Q92504 469 aa8.1□□□□□ -1.11
NCBP1-201ENST00000375130 RTN4Q9NQC3 1192 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms