RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 TPM1P09493 284 aa19.27■□□□□ 0.68
VEGFA-205ENST00000372067 CCT6AP40227 531 aaKnown RBP19.27■□□□□ 0.68
VEGFA-205ENST00000372067 ADKP55263 362 aaKnown RBP19.27■□□□□ 0.68
VEGFA-205ENST00000372067 FMR1Q06787 632 aaKnown RBP eCLIP19.27■□□□□ 0.68
VEGFA-205ENST00000372067 PAGE5Q96GU1 130 aa19.27■□□□□ 0.68
VEGFA-205ENST00000372067 BPIFA3Q9BQP9 254 aa19.27■□□□□ 0.68
VEGFA-205ENST00000372067 COL22A1Q8NFW1 1626 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-205ENST00000372067 DBNDD1Q9H9R9 158 aa19.27■□□□□ 0.68
VEGFA-205ENST00000372067 BIN2Q9UBW5 565 aaPredicted RBP19.27■□□□□ 0.68
VEGFA-205ENST00000372067 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 CCNT1O60563 726 aaKnown RBP19.26■□□□□ 0.67
VEGFA-205ENST00000372067 RCSD1Q6JBY9 416 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 GPATCH11Q8N954 259 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 PCMTD1Q96MG8 357 aaPredicted RBP19.26■□□□□ 0.67
VEGFA-205ENST00000372067 LTBP4Q8N2S1 1624 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 RASA1P20936 1047 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 DDR1Q08345 913 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 FUT2Q10981 343 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 KIAA0825Q8IV33 1275 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 C6orf50Q9HD87 102 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 PCDHA4Q9UN74 947 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 SYNRGQ9UMZ2 1314 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 MYO1CO00159 1063 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 GUCY2CP25092 1073 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 ARMCX5Q6P1M9 558 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 EGFL6Q8IUX8 553 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 CCAR2Q8N163 923 aaKnown RBP19.26■□□□□ 0.67
VEGFA-205ENST00000372067 ZNF579Q8NAF0 562 aaKnown RBP19.26■□□□□ 0.67
VEGFA-205ENST00000372067 SHISA4Q96DD7 197 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 CEP95Q96GE4 821 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 TCP11L1Q9NUJ3 509 aa19.26■□□□□ 0.67
VEGFA-205ENST00000372067 PP2D1A8MPX8 630 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 CACNB3P54284 484 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 CDK5RAP3Q96JB5 506 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 CCDC12Q8WUD4 166 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-205ENST00000372067 CCDC47Q96A33 483 aaKnown RBP19.25■□□□□ 0.67
VEGFA-205ENST00000372067 PIGSQ96S52 555 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 MMP10P09238 476 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 CCZ1BP86790 482 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 CCZ1P86791 482 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-205ENST00000372067 RTFDC1Q9BY42 306 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-205ENST00000372067 CEP83Q9Y592 693 aa19.25■□□□□ 0.67
VEGFA-205ENST00000372067 A0A087X0B3 334 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 ACTN4O43707 911 aaKnown RBP19.24■□□□□ 0.67
VEGFA-205ENST00000372067 SSBP05455 408 aaKnown RBP eCLIP19.24■□□□□ 0.679e-13■■□□□ 11.9
VEGFA-205ENST00000372067 TNNI2P48788 182 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 DNAI1Q9UI46 699 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 FLT1P17948 1338 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 TULP1O00294 542 aaPredicted RBP19.24■□□□□ 0.67
VEGFA-205ENST00000372067 N4BP3O15049 544 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 HLA-DOAP06340 250 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 GRM4Q14833 912 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 EEF2KMTQ96G04 330 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 BMP6P22004 513 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 VPS16Q9H269 839 aa19.24■□□□□ 0.67
VEGFA-205ENST00000372067 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
VEGFA-205ENST00000372067 ADAMTS3O15072 1205 aa19.23■□□□□ 0.67
VEGFA-205ENST00000372067 CASQ1P31415 396 aa19.23■□□□□ 0.67
VEGFA-205ENST00000372067 FAM196BA6NMK8 535 aa19.23■□□□□ 0.67
VEGFA-205ENST00000372067 DNAJC21Q5F1R6 531 aaKnown RBP19.23■□□□□ 0.67
VEGFA-205ENST00000372067 COA7Q96BR5 231 aa19.23■□□□□ 0.67
VEGFA-205ENST00000372067 DDX60Q8IY21 1712 aaKnown RBP19.23■□□□□ 0.67
VEGFA-205ENST00000372067 FAM205AQ6ZU69 1335 aa19.23■□□□□ 0.67
VEGFA-205ENST00000372067 ZNF397Q8NF99 534 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-205ENST00000372067 CERKQ8TCT0 537 aa19.22■□□□□ 0.67
VEGFA-205ENST00000372067 DAGLAQ9Y4D2 1042 aa19.22■□□□□ 0.67
VEGFA-205ENST00000372067 LRP5O75197 1615 aa19.22■□□□□ 0.67
VEGFA-205ENST00000372067 CICQ96RK0 1608 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-205ENST00000372067 URI1O94763 535 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-205ENST00000372067 GNA11P29992 359 aa19.22■□□□□ 0.67
VEGFA-205ENST00000372067 TXKP42681 527 aa19.22■□□□□ 0.67
VEGFA-205ENST00000372067 ATP2C1P98194 919 aaPredicted RBP19.22■□□□□ 0.67
VEGFA-205ENST00000372067 PDS5AQ29RF7 1337 aaKnown RBP19.22■□□□□ 0.67
VEGFA-205ENST00000372067 RGL2O15211 777 aa19.22■□□□□ 0.67
VEGFA-205ENST00000372067 CUL4BQ13620 913 aa19.22■□□□□ 0.67
VEGFA-205ENST00000372067 NONOQ15233 471 aaKnown RBP eCLIP19.22■□□□□ 0.673e-6■■■□□ 16.3
VEGFA-205ENST00000372067 CCDC172P0C7W6 258 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 MORC3Q14149 939 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 NLGN1Q8N2Q7 840 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 MAD2L2Q9UI95 211 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 SLC16A2P36021 539 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 PPP4CP60510 307 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 STIM1Q13586 685 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 SLC27A3Q5K4L6 730 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 TRIML1Q8N9V2 468 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 MNS1Q8NEH6 495 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 BAG1Q99933 345 aaPredicted RBP19.21■□□□□ 0.67
VEGFA-205ENST00000372067 OSBPL5Q9H0X9 879 aaPredicted RBP19.21■□□□□ 0.67
VEGFA-205ENST00000372067 FGRP09769 529 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 TYW1BQ6NUM6 668 aa19.21■□□□□ 0.67
VEGFA-205ENST00000372067 MAGEC2Q9UBF1 373 aaPredicted RBP19.21■□□□□ 0.67
VEGFA-205ENST00000372067 GPR75-ASB3A0A0A6YYF3 556 aa19.2■□□□□ 0.66
VEGFA-205ENST00000372067 TRAPPC10P48553 1259 aa19.2■□□□□ 0.66
VEGFA-205ENST00000372067 VSTM4Q8IW00 320 aa19.2■□□□□ 0.66
VEGFA-205ENST00000372067 ENOX1Q8TC92 643 aaKnown RBP19.2■□□□□ 0.66
VEGFA-205ENST00000372067 TAB2Q9NYJ8 693 aa19.2■□□□□ 0.66
VEGFA-205ENST00000372067 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms