RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ATF7IPQ6VMQ6 1270 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 ZNF775Q96BV0 537 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 GMLQ99445 158 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 CHD6Q8TD26 2715 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 ABCC4O15439 1325 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 OPLAHO14841 1288 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 ZBTB39O15060 712 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 CCL5P13501 91 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 SYN1P17600 705 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 RPS12P25398 132 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 MZF1P28698 734 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 RGS3P49796 1198 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 NBPF9Q3BBW0 867 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 SULT6B1Q6IMI4 303 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 CMTR1Q8N1G2 835 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 DIS3LQ8TF46 1054 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 RPGRQ92834 1020 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 FRAT1Q92837 279 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 RBM17Q96I25 401 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 WNK4Q96J92 1243 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 GZF1Q9H116 711 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 MBIPQ9NS73 344 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 BRPF3Q9ULD4 1205 aa7.96□□□□□ -1.14
ECHDC1-202ENST00000368289 NDUFB5O43674 189 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 BMP4P12644 408 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 MAP2K3P46734 347 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 INHBEP58166 350 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 GNAI1P63096 354 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 EHHADHQ08426 723 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 SFSWAPQ12872 951 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 NFKBIBQ15653 356 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 SUSD4Q5VX71 490 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 ZNF790Q6PG37 636 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 SP8Q8IXZ3 490 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 SMC5Q8IY18 1101 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 RGL4Q8IZJ4 473 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 GPR161Q8N6U8 529 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 SUPT20HQ8NEM7 779 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 GPR152Q8TDT2 470 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 PANK1Q8TE04 598 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 U2AF1L4Q8WU68 220 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 MYLIPQ8WY64 445 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 TTYH1Q9H313 450 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 SEMA6BQ9H3T3 888 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 PRR12Q9ULL5 1215 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 TAF1P21675 1872 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 COL4A1P02462 1669 aa7.95□□□□□ -1.14
ECHDC1-202ENST00000368289 LAMB1P07942 1786 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 DNAH14Q0VDD8 3507 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 NTSR2O95665 410 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 PTMSP20962 102 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 RIPK4P57078 832 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 DNM1Q05193 864 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 CCINQ13939 588 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 FAM26DQ5JW98 314 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 IL17REQ8NFR9 667 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 EDEM1Q92611 657 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 PNMA5Q96PV4 448 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 LRFN3Q9BTN0 628 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 SMC4Q9NTJ3 1288 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 IFT57Q9NWB7 429 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 POLLQ9UGP5 575 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 UNC79Q9P2D8 2635 aa7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 KMT2BQ9UMN6 2715 aaPredicted RBP7.94□□□□□ -1.14
ECHDC1-202ENST00000368289 CACNA1FO60840 1977 aa7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 U2SURPO15042 1029 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 ECE2O60344 883 aa7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 CD33P20138 364 aa7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 ARHGAP4P98171 946 aa7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 NFE2L2Q16236 605 aa7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 MTHFSDQ2M296 383 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 C7orf61Q8IZ16 206 aa7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 TEX13AQ9BXU3 409 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 AVENQ9NQS1 362 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 ZBTB40Q9NUA8 1239 aa7.93□□□□□ -1.14
ECHDC1-202ENST00000368289 TRANK1O15050 2925 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 SGPL1O95470 568 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 PDGFAP04085 211 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 ZBTB48P10074 688 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 CTBSQ01459 385 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 SRSF11Q05519 484 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 EXOSC9Q06265 439 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 SPEM2Q0P670 501 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 ECM1Q16610 540 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 ATCAYQ86WG3 371 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 BRI3BPQ8WY22 251 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 PAWRQ96IZ0 340 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 NECAB3Q96P71 396 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 RNF208Q9H0X6 261 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 DCTN4Q9UJW0 460 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 ISY1Q9ULR0 285 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 POLIQ9UNA4 740 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 ZNF652Q9Y2D9 606 aa7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 RRP7AQ9Y3A4 280 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-202ENST00000368289 ZFHX2Q9C0A1 2572 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms