RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MAPK8IP1Q9UQF2 711 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 TNFAIP3P21580 790 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 LTKP29376 864 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 MORC2Q9Y6X9 1032 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 LIN9Q5TKA1 542 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 VIMP08670 466 aaKnown RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■■■ 39.6
CDC42BPA-202ENST00000366764 SEPT2Q15019 361 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 EYA3Q99504 573 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 AATFQ9NY61 560 aaKnown RBP eCLIP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 AMFRQ9UKV5 643 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 TOB2Q14106 344 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 LMNTD2Q8IXW0 634 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 CASP14P31944 242 aa13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 FAM207AQ9NSI2 230 aaPredicted RBP13.04□□□□□ -0.32
CDC42BPA-202ENST00000366764 CEP104O60308 925 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 MAP2K2P36507 400 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 PPFIBP2Q8ND30 876 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 MAP3K15Q6ZN16 1313 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 TLDC2A0PJX2 215 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 CCDC169A6NNP5 214 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 VWDEQ8N2E2 1590 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 CCDC110Q8TBZ0 833 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 PAIP2Q9BPZ3 127 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 ATP8A2Q9NTI2 1148 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 CCDC87Q9NVE4 849 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 CNOT10Q9H9A5 744 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 RRP15Q9Y3B9 282 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 CCDC25Q86WR0 208 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 SLFN12Q8IYM2 578 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 CCDC14Q49A88 953 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 TUBGCP2Q9BSJ2 902 aa13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 ARMCX3Q9UH62 379 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPA-202ENST00000366764 CTNNA1P35221 906 aaKnown RBP13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 PLIN2Q99541 437 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 THAP9Q9H5L6 903 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 DKC1O60832 514 aaKnown RBP eCLIP13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 ZBED6P86452 979 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 STMN2Q93045 179 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 FAM204AQ9H8W3 233 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 STK17AQ9UEE5 414 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 PROSER3Q2NL68 480 aa13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 ZNF658Q5TYW1 1059 aaPredicted RBP13.02□□□□□ -0.32
CDC42BPA-202ENST00000366764 KCNQ3O43525 872 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 A1BGP04217 495 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 NEK8Q86SG6 692 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 GLE1Q53GS7 698 aaKnown RBP13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 ADD2P35612 726 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 STAT1P42224 750 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 WDR44Q5JSH3 913 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 PIK3C2BO00750 1634 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 KCNK9Q9NPC2 374 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 PTPRUQ92729 1446 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 E7EVH7 732 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 BUB1BO60566 1050 aaPredicted RBP13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 GNGT1P63211 74 aa13.02□□□□□ -0.33
CDC42BPA-202ENST00000366764 M0R2C6 588 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 MAN1A1P33908 653 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 NAA25Q14CX7 972 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 MYCBPQ99417 103 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 EFCC1Q9HA90 598 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 ZNF365Q70YC5 407 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 ZC3H12CQ9C0D7 883 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 MAN1B1Q9UKM7 699 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 BCAS4Q8TDM0 211 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 ERBB3P21860 1342 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 SH3GLB2Q9NR46 395 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 CRB1P82279 1406 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 TLR7Q9NYK1 1049 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 MYO5BQ9ULV0 1848 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 MFAP3LO75121 409 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 DAAM2Q86T65 1068 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 CNBD1Q8NA66 436 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 PRDM1O75626 825 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 LARGE1O95461 756 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 FERP16591 822 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 TXKP42681 527 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 ORC2Q13416 577 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 P3H4Q92791 437 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 BLZF1Q9H2G9 400 aa13.01□□□□□ -0.33
CDC42BPA-202ENST00000366764 HSPA6P17066 643 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 CEP85LQ5SZL2 805 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 OGFOD1Q8N543 542 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 PNMA1Q8ND90 353 aa13□□□□□ -0.33
CDC42BPA-202ENST00000366764 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
CDC42BPA-202ENST00000366764 PARD6BQ9BYG5 372 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms