RNA–Protein interactions for RNA: ENST00000356936.5

NCL-202, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 890 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-202ENST00000356936 ESR2Q92731 530 aa20.27■□□□□ 0.84
NCL-202ENST00000356936 KIAA0100Q14667 2235 aaKnown RBP20.27■□□□□ 0.84
NCL-202ENST00000356936 MYH4Q9Y623 1939 aa20.27■□□□□ 0.84
NCL-202ENST00000356936 ZNF236Q9UL36 1845 aa20.27■□□□□ 0.84
NCL-202ENST00000356936 TNRC18O15417 2968 aaPredicted RBP20.27■□□□□ 0.83
NCL-202ENST00000356936 PARP14Q460N5 1801 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 OAZ1P54368 228 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 IKQ13123 557 aaPredicted RBP20.26■□□□□ 0.83
NCL-202ENST00000356936 KCTD2Q14681 263 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 OLFML2BQ68BL8 750 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 CENPQQ7L2Z9 268 aaPredicted RBP20.26■□□□□ 0.83
NCL-202ENST00000356936 TBC1D10CQ8IV04 446 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 ANKLE1Q8NAG6 615 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 NPLOC4Q8TAT6 608 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 TTC14Q96N46 770 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 MMP19Q99542 508 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 HTATIP2Q9BUP3 242 aa20.26■□□□□ 0.83
NCL-202ENST00000356936 TMEM232C9JQI7 657 aa20.25■□□□□ 0.83
NCL-202ENST00000356936 PLA2G6O60733 806 aa20.25■□□□□ 0.83
NCL-202ENST00000356936 TOP1P11387 765 aaKnown RBP20.25■□□□□ 0.83
NCL-202ENST00000356936 MCCP23508 829 aa20.25■□□□□ 0.83
NCL-202ENST00000356936 SNRNP48Q6IEG0 339 aaKnown RBP20.25■□□□□ 0.83
NCL-202ENST00000356936 RCSD1Q6JBY9 416 aa20.25■□□□□ 0.83
NCL-202ENST00000356936 UBE2Q1Q7Z7E8 422 aa20.25■□□□□ 0.83
NCL-202ENST00000356936 NBPF3Q9H094 633 aa20.25■□□□□ 0.83
NCL-202ENST00000356936 SLC38A10Q9HBR0 1119 aa20.25■□□□□ 0.83
NCL-202ENST00000356936 CHMLP26374 656 aa20.24■□□□□ 0.83
NCL-202ENST00000356936 CCDC178Q5BJE1 867 aa20.24■□□□□ 0.83
NCL-202ENST00000356936 DCAF4Q8WV16 495 aa20.24■□□□□ 0.83
NCL-202ENST00000356936 FLRT1Q9NZU1 646 aa20.24■□□□□ 0.83
NCL-202ENST00000356936 MSCO60682 206 aa20.23■□□□□ 0.83
NCL-202ENST00000356936 COBLO75128 1261 aa20.23■□□□□ 0.83
NCL-202ENST00000356936 IQCA1Q86XH1 822 aa20.23■□□□□ 0.83
NCL-202ENST00000356936 CPXCR1Q8N123 301 aa20.23■□□□□ 0.83
NCL-202ENST00000356936 CNNM2Q9H8M5 875 aa20.23■□□□□ 0.83
NCL-202ENST00000356936 FBXO40Q9UH90 709 aa20.23■□□□□ 0.83
NCL-202ENST00000356936 DIS3Q9Y2L1 958 aaKnown RBP20.23■□□□□ 0.83
NCL-202ENST00000356936 CCND3P30281 292 aaPredicted RBP20.22■□□□□ 0.83
NCL-202ENST00000356936 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
NCL-202ENST00000356936 TMEM47Q9BQJ4 181 aa20.22■□□□□ 0.83
NCL-202ENST00000356936 KRT23Q9C075 422 aa20.22■□□□□ 0.83
NCL-202ENST00000356936 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
NCL-202ENST00000356936 OGDHLQ9ULD0 1010 aa20.22■□□□□ 0.83
NCL-202ENST00000356936 NEDD4P46934 1319 aa20.22■□□□□ 0.83
NCL-202ENST00000356936 IGHA2P01877 340 aa20.21■□□□□ 0.83
NCL-202ENST00000356936 CYP2C19P33261 490 aa20.21■□□□□ 0.83
NCL-202ENST00000356936 KCTD1Q719H9 257 aa20.21■□□□□ 0.83
NCL-202ENST00000356936 NECAB2Q7Z6G3 386 aa20.21■□□□□ 0.83
NCL-202ENST00000356936 DGKHQ86XP1 1220 aa20.21■□□□□ 0.83
NCL-202ENST00000356936 CHST13Q8NET6 341 aa20.21■□□□□ 0.83
NCL-202ENST00000356936 MAML3Q96JK9 1138 aa20.21■□□□□ 0.83
NCL-202ENST00000356936 COL11A1P12107 1806 aaPredicted RBP20.2■□□□□ 0.82
NCL-202ENST00000356936 KDM4AO75164 1064 aa20.2■□□□□ 0.82
NCL-202ENST00000356936 CNGA1P29973 690 aa20.2■□□□□ 0.82
NCL-202ENST00000356936 SLC4A3P48751 1232 aa20.2■□□□□ 0.82
NCL-202ENST00000356936 DPF3Q92784 378 aa20.2■□□□□ 0.82
NCL-202ENST00000356936 DDX11Q96FC9 970 aa20.2■□□□□ 0.82
NCL-202ENST00000356936 IL25Q9H293 177 aa20.2■□□□□ 0.82
NCL-202ENST00000356936 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
NCL-202ENST00000356936 LAMA4Q16363 1823 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 PGK2P07205 417 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 CYBAP13498 195 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 ZNF792Q3KQV3 632 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 TKFCQ3LXA3 575 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 LHX8Q68G74 356 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.19■□□□□ 0.82
NCL-202ENST00000356936 CHMP4CQ96CF2 233 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 PAWRQ96IZ0 340 aaKnown RBP20.19■□□□□ 0.82
NCL-202ENST00000356936 DDX20Q9UHI6 824 aaKnown RBP20.19■□□□□ 0.82
NCL-202ENST00000356936 NRBP1Q9UHY1 535 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 PRR12Q9ULL5 1215 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 RIPK3Q9Y572 518 aa20.19■□□□□ 0.82
NCL-202ENST00000356936 U3KPZ7 1027 aaPredicted RBP20.19■□□□□ 0.82
NCL-202ENST00000356936 MKI67P46013 3256 aaKnown RBP20.18■□□□□ 0.82
NCL-202ENST00000356936 B4E1Z4 1266 aa20.18■□□□□ 0.82
NCL-202ENST00000356936 SGSM2O43147 1006 aa20.18■□□□□ 0.82
NCL-202ENST00000356936 ANKRD35Q8N283 1001 aa20.18■□□□□ 0.82
NCL-202ENST00000356936 MSL3Q8N5Y2 521 aaKnown RBP20.18■□□□□ 0.82
NCL-202ENST00000356936 PDHBP11177 359 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 TRDNQ13061 729 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 BTNL9Q6UXG8 535 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 ZSCAN10Q96SZ4 725 aaPredicted RBP20.17■□□□□ 0.82
NCL-202ENST00000356936 ZKSCAN3Q9BRR0 538 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 UBAC1Q9BSL1 405 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 ACAD9Q9H845 621 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 ZSWIM5Q9P217 1185 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 PNMA2Q9UL42 364 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 NR2E3Q9Y5X4 410 aa20.17■□□□□ 0.82
NCL-202ENST00000356936 SEPT4O43236 478 aa20.16■□□□□ 0.82
NCL-202ENST00000356936 GPATCH4Q5T3I0 446 aaKnown RBP20.16■□□□□ 0.82
NCL-202ENST00000356936 ANKS1AQ92625 1134 aa20.16■□□□□ 0.82
NCL-202ENST00000356936 TINF2Q9BSI4 451 aa20.16■□□□□ 0.82
NCL-202ENST00000356936 C11orf49Q9H6J7 331 aa20.16■□□□□ 0.82
NCL-202ENST00000356936 DNAJC25-GNG10A0A024R161 153 aa20.15■□□□□ 0.82
NCL-202ENST00000356936 SNHG28P0DPA3 235 aa20.15■□□□□ 0.82
NCL-202ENST00000356936 BMP2KLQ5H9B9 411 aa20.15■□□□□ 0.82
NCL-202ENST00000356936 SYDE2Q5VT97 1194 aa20.15■□□□□ 0.82
NCL-202ENST00000356936 KIAA1211Q6ZU35 1233 aa20.15■□□□□ 0.82
NCL-202ENST00000356936 ZNF467Q7Z7K2 595 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms