RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 MKL1Q969V6 931 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 NRBP1Q9UHY1 535 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 ZNF214Q9UL59 606 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-204ENST00000356316 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
CAPN3-204ENST00000356316 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 ROBO3Q96MS0 1386 aa12.68□□□□□ -0.38
CAPN3-204ENST00000356316 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
CAPN3-204ENST00000356316 TFAP4Q01664 338 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 ZNF792Q3KQV3 632 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 POTEHQ6S545 545 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 SLC39A5Q6ZMH5 540 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 RNF180Q86T96 592 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 SEC62Q99442 399 aaKnown RBP12.67□□□□□ -0.38
CAPN3-204ENST00000356316 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-204ENST00000356316 MTMR4Q9NYA4 1195 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 SYNPO2Q9UMS6 1093 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 ATP11BQ9Y2G3 1177 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 PLXNA1Q9UIW2 1896 aa12.67□□□□□ -0.38
CAPN3-204ENST00000356316 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-204ENST00000356316 FDX1P10109 184 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 ADCYAP1R1P41586 468 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 RTP1P59025 263 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 PPARAQ07869 468 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 IKQ13123 557 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-204ENST00000356316 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 ANKRD35Q8N283 1001 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 NEDD1Q8NHV4 660 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-204ENST00000356316 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 XPNPEP3Q9NQH7 507 aa12.66□□□□□ -0.38
CAPN3-204ENST00000356316 GREB1LQ9C091 1923 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-204ENST00000356316 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 ATP2A1O14983 1001 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 BMP3P12645 472 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 AKR1A1P14550 325 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 LRRC41Q15345 812 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
CAPN3-204ENST00000356316 MSL3Q8N5Y2 521 aaKnown RBP12.65□□□□□ -0.38
CAPN3-204ENST00000356316 GMCL1P1Q8NEA9 526 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 PRDM5Q9NQX1 630 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-204ENST00000356316 FBXO40Q9UH90 709 aa12.65□□□□□ -0.38
CAPN3-204ENST00000356316 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
CAPN3-204ENST00000356316 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 OAZ1P54368 228 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 CRBNQ96SW2 442 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
CAPN3-204ENST00000356316 FAM184BQ9ULE4 1060 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 STX8Q9UNK0 236 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 RIPK3Q9Y572 518 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 SMCHD1A6NHR9 2005 aa12.64□□□□□ -0.39
CAPN3-204ENST00000356316 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
CAPN3-204ENST00000356316 PGK1P00558 417 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 SLC1A4P43007 532 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 STAT2P52630 851 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 AAMPQ13685 434 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-204ENST00000356316 FAM160B2Q86V87 743 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 CHST13Q8NET6 341 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 LAMA3Q16787 3333 aa12.63□□□□□ -0.39
CAPN3-204ENST00000356316 SYNGAP1Q96PV0 1343 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-204ENST00000356316 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-204ENST00000356316 MCCP23508 829 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 PDE1AP54750 535 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 HDAC1Q13547 482 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-204ENST00000356316 TRIM60Q495X7 471 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 MAMDC4Q6UXC1 1216 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 CCDC129Q6ZRS4 1044 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 TICAM2Q86XR7 235 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 NUP133Q8WUM0 1156 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 STAG1Q8WVM7 1258 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 CHMP4CQ96CF2 233 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 GMCL1Q96IK5 515 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 SPC25Q9HBM1 224 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 HOMER2Q9NSB8 354 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-204ENST00000356316 PHF24Q9UPV7 400 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 TACC3Q9Y6A5 838 aa12.62□□□□□ -0.39
CAPN3-204ENST00000356316 COL6A3P12111 3177 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms