RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 RBL2Q08999 1139 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 CTNNBL1Q8WYA6 563 aaPredicted RBP13.71□□□□□ -0.21
COLCA1-201ENST00000355430 NUP58Q9BVL2 599 aa13.71□□□□□ -0.21
COLCA1-201ENST00000355430 COL15A1P39059 1388 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 TNKSO95271 1327 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 KDM4FA0A1W2PPD8 638 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.22
COLCA1-201ENST00000355430 C8orf74Q6P047 294 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 OTUD6BQ8N6M0 293 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 RABGGTAQ92696 567 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 ATG3Q9NT62 314 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.22
COLCA1-201ENST00000355430 PPLO60437 1756 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 MYCLP12524 364 aaPredicted RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 UBE3CQ15386 1083 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 TAF12Q16514 161 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 CERKLQ49MI3 558 aaPredicted RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 SMYD4Q8IYR2 804 aaPredicted RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 PDE11AQ9HCR9 933 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 DDX41Q9UJV9 622 aaKnown RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 CNGA1P29973 690 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 PPM1FP49593 454 aaPredicted RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 USP14P54578 494 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 NLRP10Q86W26 655 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 FMR1NBQ8N0W7 255 aaPredicted RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 ALDH8A1Q9H2A2 487 aaPredicted RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 GOLGA6BA6NDN3 693 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 BCAMP50895 628 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 SAMSN1Q9NSI8 373 aaKnown RBP13.7□□□□□ -0.22
COLCA1-201ENST00000355430 MYO3BQ8WXR4 1341 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 ADD2P35612 726 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 SAR1BQ9Y6B6 198 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 USP31Q70CQ4 1352 aa13.7□□□□□ -0.22
COLCA1-201ENST00000355430 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 SOWAHDA6NJG2 315 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 TRAF5O00463 557 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 TXKP42681 527 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 IMPG2Q9BZV3 1241 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 SETD1BQ9UPS6 1966 aaKnown RBP13.69□□□□□ -0.22
COLCA1-201ENST00000355430 GSTTP1A0A1W2PQM5 241 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 VGLL3A8MV65 326 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 KRT13P13646 458 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 SLC35F6Q8N357 371 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 COA1Q9GZY4 146 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 KIF20BQ96Q89 1820 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 KMT5BQ4FZB7 885 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 SLC10A4Q96EP9 437 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 HOMER2Q9NSB8 354 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 AXIN2Q9Y2T1 843 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 GOLGA6L10A0A0M3HER8 536 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 FAM13AO94988 1023 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 RAPGEF1Q13905 1077 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 SND1Q7KZF4 910 aaKnown RBP eCLIP13.69□□□□□ -0.22
COLCA1-201ENST00000355430 OR8K1Q8NGG5 319 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 SLC16A10Q8TF71 515 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 PDE8BO95263 885 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 PPP1R2P41236 205 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 TNNC1P63316 161 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 ARHGEF1Q92888 912 aaKnown RBP13.69□□□□□ -0.22
COLCA1-201ENST00000355430 FRMPD1Q5SYB0 1578 aa13.69□□□□□ -0.22
COLCA1-201ENST00000355430 GBP2P32456 591 aaPredicted RBP13.68□□□□□ -0.22
COLCA1-201ENST00000355430 NR5A1Q13285 461 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 TYW1BQ6NUM6 668 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 CABP7Q86V35 215 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 RGS22Q8NE09 1264 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 FOXP1Q9H334 677 aaPredicted RBP13.68□□□□□ -0.22
COLCA1-201ENST00000355430 CDC23Q9UJX2 597 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 PXDNLA1KZ92 1463 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 SHPRHQ149N8 1683 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 ANKRD62A6NC57 917 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 TMEM232C9JQI7 657 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 PRKAG2Q9UGJ0 569 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 LONRF2Q1L5Z9 754 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 DYMQ7RTS9 669 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 TBC1D5Q92609 795 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 SPATA31A5Q5VU36 1347 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 SPATA31A7Q8IWB4 1347 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 MMP1P03956 469 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 PNMA6AP0CW24 399 aaPredicted RBP13.68□□□□□ -0.22
COLCA1-201ENST00000355430 PTGDRQ13258 359 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 PARD6BQ9BYG5 372 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 PKD2L1Q9P0L9 805 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 STK24Q9Y6E0 443 aa13.68□□□□□ -0.22
COLCA1-201ENST00000355430 COPB1P53618 953 aaKnown RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 TERF2Q15554 542 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 GNPTABQ3T906 1256 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 CCDC121Q6ZUS5 278 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 NLRX1Q86UT6 975 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 TAF6LQ9Y6J9 622 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
COLCA1-201ENST00000355430 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 CHGBP05060 677 aa13.67□□□□□ -0.22
COLCA1-201ENST00000355430 FAM207AQ9NSI2 230 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms