RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 SNX12Q9UMY4 172 aa13.7□□□□□ -0.22
TRERF1-202ENST00000354325 PPP1R3GB7ZBB8 358 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 PPP1R37O75864 691 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 PARP1P09874 1014 aaKnown RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 TRAPPC10P48553 1259 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 CLNS1AP54105 237 aaKnown RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 MAP3K12Q12852 859 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 RIN2Q8WYP3 895 aaPredicted RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 SYMPKQ92797 1274 aaKnown RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 VCPKMTQ9H867 229 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 MACROD2A1Z1Q3 448 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 N4BP2L2Q92802 583 aaPredicted RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 PCDHB6Q9Y5E3 794 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 CDK17Q00537 523 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 ZKSCAN8Q15776 578 aaPredicted RBP13.69□□□□□ -0.22
TRERF1-202ENST00000354325 KCNJ14Q9UNX9 436 aa13.69□□□□□ -0.22
TRERF1-202ENST00000354325 STAT6P42226 847 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 ACTN3Q08043 901 aaPredicted RBP13.68□□□□□ -0.22
TRERF1-202ENST00000354325 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 PDCLQ13371 301 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 MTMR3Q13615 1198 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 PREPLQ4J6C6 727 aaPredicted RBP13.68□□□□□ -0.22
TRERF1-202ENST00000354325 RRP12Q5JTH9 1297 aaKnown RBP13.68□□□□□ -0.22
TRERF1-202ENST00000354325 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 ANKS4BQ8N8V4 417 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 CHGBP05060 677 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 MATR3P43243 847 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRERF1-202ENST00000354325 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 TTC38Q5R3I4 469 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 SH3RF1Q7Z6J0 888 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 NOX5Q96PH1 765 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
TRERF1-202ENST00000354325 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.68□□□□□ -0.22
TRERF1-202ENST00000354325 GCOM1H8Y6P7 765 aaPredicted RBP13.68□□□□□ -0.22
TRERF1-202ENST00000354325 ZMYND10O75800 440 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 MYZAPP0CAP1 466 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 MAGEC3Q8TD91 643 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 LY9Q9HBG7 655 aa13.68□□□□□ -0.22
TRERF1-202ENST00000354325 TTC26A0AVF1 554 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 E7EVH7 732 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 GCP02774 474 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 RPN1P04843 607 aaKnown RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 LSP1P33241 339 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 IRX1P78414 480 aaPredicted RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 APTXQ7Z2E3 356 aaKnown RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 HDAC6Q9UBN7 1215 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 PPP1R12AO14974 1030 aaPredicted RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 FAM107AO95990 144 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 ADD2P35612 726 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 ZAP70P43403 619 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 NTRK3Q16288 839 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 NLRP14Q86W24 1093 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 CACNA2D3Q8IZS8 1091 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 SPATA4Q8NEY3 305 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 ZNF473Q8WTR7 871 aaKnown RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 NHEJ1Q9H9Q4 299 aaPredicted RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 BATF3Q9NR55 127 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 PRAMEF22A3QJZ6 481 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 HOXA7P31268 230 aaPredicted RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 CCHCR1Q8TD31 782 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRERF1-202ENST00000354325 SLIT3O75094 1523 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 LMO7Q8WWI1 1683 aa13.67□□□□□ -0.22
TRERF1-202ENST00000354325 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 KAT2BQ92831 832 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 DHTKD1Q96HY7 919 aaPredicted RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 PUS7LQ9H0K6 701 aaKnown RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 NUCKS1Q9H1E3 243 aaKnown RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 MAGEF1Q9HAY2 307 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 PIK3C2AO00443 1686 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 AMPD3Q01432 767 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 IFT88Q13099 833 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 BIRC3Q13489 604 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 IFI16Q16666 785 aaKnown RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 NAA35Q5VZE5 725 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 CYB5R4Q7L1T6 521 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 IGDCC4Q8TDY8 1250 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 CHP1Q99653 195 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 BRD2P25440 801 aaKnown RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 ATP1A2P50993 1020 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 FOXO4P98177 505 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 CD302Q8IX05 232 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 PARP9Q8IXQ6 854 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 ATP6V1G3Q96LB4 118 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 CCDC43Q96MW1 224 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms