RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 NOLC1Q14978 699 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMAD9-201ENST00000350148 APBB1IPQ7Z5R6 666 aaPredicted RBP13.6□□□□□ -0.23
SMAD9-201ENST00000350148 BICD1Q96G01 975 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 SERTAD1Q9UHV2 236 aa13.6□□□□□ -0.23
SMAD9-201ENST00000350148 CCDC175P0C221 793 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 BMP3P12645 472 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 NEK11Q8NG66 645 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 DCPSQ96C86 337 aaKnown RBP13.59□□□□□ -0.23
SMAD9-201ENST00000350148 SPAG5Q96R06 1193 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 MAP3K14Q99558 947 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 PNMA6FA0A0J9YX94 578 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 PAFAH1B1P43034 410 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 SMTNP53814 917 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 CYB5R4Q7L1T6 521 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 HDLBPQ00341 1268 aaKnown RBP13.59□□□□□ -0.23
SMAD9-201ENST00000350148 ZBTB9Q96C00 473 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 C16orf45Q96MC5 204 aaPredicted RBP13.59□□□□□ -0.23
SMAD9-201ENST00000350148 FRMPD2Q68DX3 1309 aaPredicted RBP13.59□□□□□ -0.23
SMAD9-201ENST00000350148 CACNA1FO60840 1977 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 NR1I2O75469 434 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 FANCCQ00597 558 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 UBXN1Q04323 297 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 C12orf60Q5U649 245 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
SMAD9-201ENST00000350148 GSDMAQ96QA5 445 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 IWS1Q96ST2 819 aa13.59□□□□□ -0.23
SMAD9-201ENST00000350148 SRPRBQ9Y5M8 271 aaKnown RBP13.59□□□□□ -0.23
SMAD9-201ENST00000350148 GOLGA6L7A0A1B0GV03 622 aa13.58□□□□□ -0.23
SMAD9-201ENST00000350148 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.23
SMAD9-201ENST00000350148 TMEM232C9JQI7 657 aa13.58□□□□□ -0.23
SMAD9-201ENST00000350148 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.23
SMAD9-201ENST00000350148 CTNND2Q9UQB3 1225 aa13.58□□□□□ -0.23
SMAD9-201ENST00000350148 PCDHA1Q9Y5I3 950 aa13.58□□□□□ -0.23
SMAD9-201ENST00000350148 AKR1B10O60218 316 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 EPB41P11171 864 aaKnown RBP13.58□□□□□ -0.24
SMAD9-201ENST00000350148 PPP4CP60510 307 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 SEMA3FQ13275 785 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 INF2Q27J81 1249 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 GNPTABQ3T906 1256 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 MAP9Q49MG5 647 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 CEP135Q66GS9 1140 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 LUC7L2Q9Y383 392 aaKnown RBP13.58□□□□□ -0.24
SMAD9-201ENST00000350148 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.24
SMAD9-201ENST00000350148 AKR1B15C9JRZ8 316 aaPredicted RBP13.58□□□□□ -0.24
SMAD9-201ENST00000350148 ZRSR2Q15696 482 aaKnown RBP13.58□□□□□ -0.24
SMAD9-201ENST00000350148 PFKFB3Q16875 520 aaPredicted RBP13.58□□□□□ -0.24
SMAD9-201ENST00000350148 ARHGAP27Q6ZUM4 889 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 KIFC2Q96AC6 838 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 CETN3O15182 167 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 DTNBO60941 627 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 CFBP00751 764 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 U2AF2P26368 475 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMAD9-201ENST00000350148 PTGDRQ13258 359 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
SMAD9-201ENST00000350148 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 DDX25Q9UHL0 483 aaKnown RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 HERC5Q9UII4 1024 aaKnown RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 hCG_1642624A0A1W2PR95 340 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 TMCO5BA8MYB1 307 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 PRPHP41219 470 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 AP3B2Q13367 1082 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 SYDE2Q5VT97 1194 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 CCDC125Q86Z20 511 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 ENAHQ8N8S7 591 aaPredicted RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 DYNLL2Q96FJ2 89 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 PCDHA12Q9UN75 941 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 URI1O94763 535 aaPredicted RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 SARNPP82979 210 aaKnown RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 NAA15Q9BXJ9 866 aaKnown RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 GYS1P13807 737 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 ERCC5P28715 1186 aaPredicted RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 CKAP4Q07065 602 aaKnown RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 SEPT2Q15019 361 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 USH1GQ495M9 461 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 DHX37Q8IY37 1157 aaKnown RBP13.57□□□□□ -0.24
SMAD9-201ENST00000350148 PPP1R9BQ96SB3 815 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 C21orf2O43822 256 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 ASNSP08243 561 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 STX17P56962 302 aa13.57□□□□□ -0.24
SMAD9-201ENST00000350148 SNAP23O00161 211 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMAD9-201ENST00000350148 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
SMAD9-201ENST00000350148 SALL1Q9NSC2 1324 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 TUBB2AQ13885 445 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 CSGALNACT2Q8N6G5 542 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 SLC17A8Q8NDX2 589 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 TUBB2BQ9BVA1 445 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 TSGA10Q9BZW7 698 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 CYP2D7A0A087X1C5 515 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 IKBKBO14920 756 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 ENTPD3O75355 529 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms