RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 PDE4BQ07343 736 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 RCN2Q14257 317 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 TACC3Q9Y6A5 838 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 CTCFP49711 727 aaPredicted RBP14.92□□□□□ -0.02
TRIO-202ENST00000344204 FRMD4BQ9Y2L6 1034 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 ATP8A1Q9Y2Q0 1164 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 MAST1Q9Y2H9 1570 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 KLHL30Q0D2K2 578 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 KDM1AO60341 852 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 RTEL1Q9NZ71 1219 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 TCOF1Q13428 1488 aaKnown RBP14.92□□□□□ -0.02
TRIO-202ENST00000344204 PLEKHG2Q9H7P9 1386 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 KIAA0586Q9BVV6 1533 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 NFU1Q9UMS0 254 aa14.92□□□□□ -0.02
TRIO-202ENST00000344204 RNF113AO15541 343 aaKnown RBP14.91□□□□□ -0.02
TRIO-202ENST00000344204 DIAPH2O60879 1101 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 TNFAIP3P21580 790 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 ARHGAP22Q7Z5H3 698 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 GLE1Q53GS7 698 aaKnown RBP14.91□□□□□ -0.02
TRIO-202ENST00000344204 KIFAP3Q92845 792 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 IGHMBP2P38935 993 aaKnown RBP14.91□□□□□ -0.02
TRIO-202ENST00000344204 MAK16Q9BXY0 300 aaKnown RBP14.91□□□□□ -0.02
TRIO-202ENST00000344204 SNRKQ9NRH2 765 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 CCND1P24385 295 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 CABP4P57796 275 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 GDAP1Q8TB36 358 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 PPP1R1BQ9UD71 204 aaPredicted RBP14.91□□□□□ -0.02
TRIO-202ENST00000344204 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 ALDH1L1O75891 902 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 LMNB1P20700 586 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 ZNF174Q15697 407 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 IL17RAQ96F46 866 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 USP28Q96RU2 1077 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 DPH5Q9H2P9 285 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 CABP5Q9NP86 173 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 GUCY1A3Q02108 690 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 CD248Q9HCU0 757 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 SPATA31E1Q6ZUB1 1445 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 CALM1P0DP23 149 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 CALM2P0DP24 149 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 CALM3P0DP25 149 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 RMI1Q9H9A7 625 aa14.91□□□□□ -0.02
TRIO-202ENST00000344204 PPP2R2AP63151 447 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 ATP6V1G3Q96LB4 118 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 CA8P35219 290 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 LSM14BQ9BX40 385 aaKnown RBP14.9□□□□□ -0.02
TRIO-202ENST00000344204 COPB1P53618 953 aaKnown RBP14.9□□□□□ -0.02
TRIO-202ENST00000344204 PPP4R3AQ6IN85 833 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 ARHGEF25Q86VW2 580 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 GNAQP50148 359 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 ZNF449Q6P9G9 518 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 COG1Q8WTW3 980 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 PLIN2Q99541 437 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 SLC7A5Q01650 507 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 MYO1FO00160 1098 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 ZSWIM6Q9HCJ5 1215 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 RBL2Q08999 1139 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 GRAMD1BQ3KR37 738 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 SV2BQ7L1I2 683 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 CCDC89Q8N998 374 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 CCT8L2Q96SF2 557 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 TMCC1O94876 653 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 FMO2Q99518 471 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 TMOD2Q9NZR1 351 aa14.9□□□□□ -0.02
TRIO-202ENST00000344204 KCNJ6P48051 423 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 ADCY2Q08462 1091 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 ARHGEF18Q6ZSZ5 1173 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 MAGI1Q96QZ7 1491 aaPredicted RBP14.89□□□□□ -0.03
TRIO-202ENST00000344204 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 MYSM1Q5VVJ2 828 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 SLC40A1Q9NP59 571 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 PGRMC1O00264 195 aaKnown RBP14.89□□□□□ -0.03
TRIO-202ENST00000344204 PDZD8Q8NEN9 1154 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 WDR24Q96S15 920 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 HAUS8Q9BT25 410 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 NDE1Q9NXR1 346 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 NOVA2Q9UNW9 492 aaKnown RBP14.89□□□□□ -0.03
TRIO-202ENST00000344204 KRT10P13645 584 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 EIF4E1BA6NMX2 242 aaKnown RBP14.89□□□□□ -0.03
TRIO-202ENST00000344204 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 PACS2Q86VP3 889 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 SNX1Q13596 522 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.89□□□□□ -0.03
TRIO-202ENST00000344204 PDE4DQ08499 809 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 TMEM60Q9H2L4 133 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 TBC1D23Q9NUY8 699 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 ABCC4O15439 1325 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 CTAGE3PQ8IX95 158 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 HELLSQ9NRZ9 838 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 RGL1Q9NZL6 768 aa14.89□□□□□ -0.03
TRIO-202ENST00000344204 CDR2Q01850 454 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 SLC4A7Q9Y6M7 1214 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 GRM8O00222 908 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 GNAT1P11488 350 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
TRIO-202ENST00000344204 SMTNP53814 917 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms