RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 EBAG9O00559 213 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 STAG2Q8N3U4 1231 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 SH3RF3Q8TEJ3 882 aaPredicted RBP13.66□□□□□ -0.22
TMEM220-201ENST00000341871 WASF1Q92558 559 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 CRNKL1Q9BZJ0 848 aaKnown RBP13.66□□□□□ -0.22
TMEM220-201ENST00000341871 ETAA1Q9NY74 926 aa13.66□□□□□ -0.22
TMEM220-201ENST00000341871 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
TMEM220-201ENST00000341871 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 CCNHP51946 323 aaPredicted RBP13.65□□□□□ -0.22
TMEM220-201ENST00000341871 CLEC10AQ8IUN9 316 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 XBP1P17861 261 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 ERCC3P19447 782 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
TMEM220-201ENST00000341871 HEATR3Q7Z4Q2 680 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 SRBD1Q8N5C6 995 aaKnown RBP13.65□□□□□ -0.22
TMEM220-201ENST00000341871 CNBD1Q8NA66 436 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.22
TMEM220-201ENST00000341871 SAMSN1Q9NSI8 373 aaKnown RBP13.65□□□□□ -0.22
TMEM220-201ENST00000341871 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.65□□□□□ -0.22
TMEM220-201ENST00000341871 ITGB4P16144 1822 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 A0A1B0GUA9 196 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 UFL1O94874 794 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 BMP6P22004 513 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 FMR1Q06787 632 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 ALX1Q15699 326 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 ZC3H12AQ5D1E8 599 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 TRAPPC3LQ5T215 181 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 ARMCX5Q6P1M9 558 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 KIF9Q9HAQ2 790 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 NFE2L3Q9Y4A8 694 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 EFCAB8A8MWE9 144 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 RPSAP08865 295 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 SNX1Q13596 522 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 POSTNQ15063 836 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 ARMC2Q8NEN0 867 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 FUT8Q9BYC5 575 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 L2HGDHQ9H9P8 463 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 ROBO1Q9Y6N7 1651 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 KRT2P35908 639 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 ACTN3Q08043 901 aaPredicted RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 RESP18Q5W5W9 173 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 SYMPKQ92797 1274 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 ZBTB10Q96DT7 871 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 MXD3Q9BW11 206 aa13.64□□□□□ -0.23
TMEM220-201ENST00000341871 THRAP3Q9Y2W1 955 aaKnown RBP13.64□□□□□ -0.23
TMEM220-201ENST00000341871 LRP6O75581 1613 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 A0A087X0B3 334 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 ENO4A6NNW6 628 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 CUTAO60888 179 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 MYL5Q02045 173 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 MRFAP1L1Q96HT8 127 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 CABS1Q96KC9 395 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 KAT14Q9H8E8 782 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 FAM204AQ9H8W3 233 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 MYH14Q7Z406 1995 aaKnown RBP13.63□□□□□ -0.23
TMEM220-201ENST00000341871 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 TSPY3P0CV98 308 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 TSPY8P0CW00 308 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 TOP1P11387 765 aaKnown RBP13.63□□□□□ -0.23
TMEM220-201ENST00000341871 GBP2P32456 591 aaPredicted RBP13.63□□□□□ -0.23
TMEM220-201ENST00000341871 PLCD1P51178 756 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 PTGDRQ13258 359 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 NCAPHQ15003 741 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 RBBP5Q15291 538 aaKnown RBP13.63□□□□□ -0.23
TMEM220-201ENST00000341871 FBXL16Q8N461 479 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 SH3GL3Q99963 347 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 NARFQ9UHQ1 456 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 NUP98P52948 1817 aa13.63□□□□□ -0.23
TMEM220-201ENST00000341871 SSBP05455 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
TMEM220-201ENST00000341871 CCZ1BP86790 482 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 CCZ1P86791 482 aaPredicted RBP13.62□□□□□ -0.23
TMEM220-201ENST00000341871 SEC23AQ15436 765 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 RILPL1Q5EBL4 403 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 DESI2Q9BSY9 194 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 FBXO2Q9UK22 296 aaPredicted RBP13.62□□□□□ -0.23
TMEM220-201ENST00000341871 MAN1B1Q9UKM7 699 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 FAM169AQ9Y6X4 670 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 AKAP11Q9UKA4 1901 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 KIAA0754O94854 1291 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 CCT6AP40227 531 aaKnown RBP13.62□□□□□ -0.23
TMEM220-201ENST00000341871 PPP2R3AQ06190 1150 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
TMEM220-201ENST00000341871 PKN1Q16512 942 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 KCNV1Q6PIU1 500 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
TMEM220-201ENST00000341871 ABCC6O95255 1503 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 EME2A4GXA9 379 aaPredicted RBP13.62□□□□□ -0.23
TMEM220-201ENST00000341871 MYBL2P10244 700 aa13.62□□□□□ -0.23
TMEM220-201ENST00000341871 ETF1P62495 437 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms