RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 GMLQ99445 158 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 SPZ1Q9BXG8 430 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 JMJD4Q9H9V9 463 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 ANO10Q9NW15 660 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 FOCADQ5VW36 1801 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 USP17L10C9JJH3 530 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 ACTN4O43707 911 aaKnown RBP8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 EDIL3O43854 480 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 CXCL9Q07325 125 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 MIGA2Q7L4E1 593 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 ADGRF4Q8IZF3 695 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 CSRNP1Q96S65 589 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 PLIN2Q99541 437 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 MRIQ9BWK5 157 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 RIOX1Q9H6W3 641 aa8.45□□□□□ -1.06
SRFBP1-201ENST00000339397 PSDA5PKW4 1024 aaPredicted RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 SPDYE2BA6NHP3 402 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 BECN2A8MW95 431 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 SPDYE6P0CI01 402 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 SNHG28P0DPA3 235 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 ATP1A3P13637 1013 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 ATP2C1P98194 919 aaPredicted RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 ZNF543Q08ER8 600 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 ARID5BQ14865 1188 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 NCAPHQ15003 741 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 NBPF9Q3BBW0 867 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 SPICE1Q8N0Z3 855 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 RRP36Q96EU6 259 aaKnown RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 TIGD1Q96MW7 591 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 TMEM39BQ9GZU3 492 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 ZMYND12Q9H0C1 365 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 HSD3B7Q9H2F3 369 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 KCNF1Q9H3M0 494 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 SWAP70Q9UH65 585 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 TUBE1Q9UJT0 475 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 RGPD3A6NKT7 1758 aaPredicted RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 RGPD4Q7Z3J3 1758 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 QSER1Q2KHR3 1735 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC194A0A1B0GVG4 234 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 A0A1W2PRG0 241 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 COBLO75128 1261 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 GH2P01242 217 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 NLRP12P59046 1061 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 FKBP1AP62942 108 aaKnown RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 HDLBPQ00341 1268 aaKnown RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC96Q2M329 555 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC84Q86UT8 332 aaPredicted RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 RTKN2Q8IZC4 609 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 LRRC15Q8TF66 581 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 GJA10Q969M2 543 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 MTRQ99707 1265 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 VEZTQ9HBM0 779 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 CEP131Q9UPN4 1083 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 ZKSCAN5Q9Y2L8 839 aa8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 ZNF646O15015 1829 aaPredicted RBP8.44□□□□□ -1.06
SRFBP1-201ENST00000339397 GOLGA6L19H0YKK7 550 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 PTGS1P23219 599 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 CALML3P27482 149 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 LMOD1P29536 600 aaPredicted RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 CLCN1P35523 988 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 ECE1P42892 770 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 ZNF75DP51815 510 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 PRELPP51888 382 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 LRMPQ12912 555 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 POSTNQ15063 836 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 UBE2SQ16763 222 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 LETM2Q2VYF4 491 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC144BQ3MJ40 725 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 KIAA1755Q5JYT7 1200 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 RBM26Q5T8P6 1007 aaKnown RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 TATDN1Q6P1N9 297 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 PLA2G4DQ86XP0 818 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 CEP57L1Q8IYX8 460 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 ZNF579Q8NAF0 562 aaKnown RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 MED15Q96RN5 788 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 PSMD1Q99460 953 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 EHD4Q9H223 541 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 SH3GLB2Q9NR46 395 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 PIM2Q9P1W9 311 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 PLIN4Q96Q06 1357 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 SIPA1L1O43166 1804 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 MSNP26038 577 aaKnown RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 ZRSR1Q15695 479 aaKnown RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 CCDC186Q7Z3E2 898 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 SMYD4Q8IYR2 804 aaPredicted RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 SUPT20HQ8NEM7 779 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 BLZF1Q9H2G9 400 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 DHX36Q9H2U1 1008 aaKnown RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 SEC63Q9UGP8 760 aaKnown RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 MAN1B1Q9UKM7 699 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 NFKBIEO00221 500 aa8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 CCNT1O60563 726 aaKnown RBP8.43□□□□□ -1.06
SRFBP1-201ENST00000339397 KARSQ15046 597 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms