RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 TMEM232C9JQI7 657 aa34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 ADORA2AP29274 412 aa34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 RCSD1Q6JBY9 416 aa34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 DEFB118Q96PH6 123 aa34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 CNNM2Q9H8M5 875 aa34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 KRT23Q9C075 422 aa34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 NBPF3Q9H094 633 aa34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 PAK6Q9NQU5 681 aaPredicted RBP34.36■■■■□ 3.09
SYNGR1-202ENST00000318801 COL11A1P12107 1806 aaPredicted RBP34.35■■■■□ 3.09
SYNGR1-202ENST00000318801 PRKAR2AP13861 404 aaKnown RBP34.35■■■■□ 3.09
SYNGR1-202ENST00000318801 NOVP48745 357 aa34.35■■■■□ 3.09
SYNGR1-202ENST00000318801 KCTD2Q14681 263 aa34.35■■■■□ 3.09
SYNGR1-202ENST00000318801 ZNF214Q9UL59 606 aaPredicted RBP34.35■■■■□ 3.09
SYNGR1-202ENST00000318801 DCAF4Q8WV16 495 aa34.34■■■■□ 3.09
SYNGR1-202ENST00000318801 MTMR7Q9Y216 660 aa34.34■■■■□ 3.09
SYNGR1-202ENST00000318801 ATP2A1O14983 1001 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 PLA2G6O60733 806 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 OAZ1P54368 228 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 CCL14Q16627 93 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 SNRNP48Q6IEG0 339 aaKnown RBP34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 KIAA1211Q6ZU35 1233 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 CPXCR1Q8N123 301 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 MMP19Q99542 508 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 SLC38A10Q9HBR0 1119 aa34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 U3KPZ7 1027 aaPredicted RBP34.33■■■■□ 3.09
SYNGR1-202ENST00000318801 TRDNQ13061 729 aa34.32■■■■□ 3.08
SYNGR1-202ENST00000318801 REPS2Q8NFH8 660 aa34.32■■■■□ 3.08
SYNGR1-202ENST00000318801 TMEM47Q9BQJ4 181 aa34.32■■■■□ 3.08
SYNGR1-202ENST00000318801 LAMA4Q16363 1823 aa34.32■■■■□ 3.08
SYNGR1-202ENST00000318801 KDM4AO75164 1064 aa34.31■■■■□ 3.08
SYNGR1-202ENST00000318801 SLC4A3P48751 1232 aa34.31■■■■□ 3.08
SYNGR1-202ENST00000318801 TRIM32Q13049 653 aa34.31■■■■□ 3.08
SYNGR1-202ENST00000318801 CCDC96Q2M329 555 aa34.31■■■■□ 3.08
SYNGR1-202ENST00000318801 MAP3K21Q5TCX8 1036 aa34.31■■■■□ 3.08
SYNGR1-202ENST00000318801 CHMP4CQ96CF2 233 aa34.31■■■■□ 3.08
SYNGR1-202ENST00000318801 SGSM2O43147 1006 aa34.3■■■■□ 3.08
SYNGR1-202ENST00000318801 CACNB2Q08289 660 aaPredicted RBP34.3■■■■□ 3.08
SYNGR1-202ENST00000318801 KCTD1Q719H9 257 aa34.3■■■■□ 3.08
SYNGR1-202ENST00000318801 DGKHQ86XP1 1220 aa34.3■■■■□ 3.08
SYNGR1-202ENST00000318801 NEDD4P46934 1319 aa34.3■■■■□ 3.08
SYNGR1-202ENST00000318801 IL25Q9H293 177 aa34.29■■■■□ 3.08
SYNGR1-202ENST00000318801 FBXO40Q9UH90 709 aa34.29■■■■□ 3.08
SYNGR1-202ENST00000318801 ZNFX1Q9P2E3 1918 aaKnown RBP34.28■■■■□ 3.08
SYNGR1-202ENST00000318801 OLFML2BQ68BL8 750 aa34.28■■■■□ 3.08
SYNGR1-202ENST00000318801 NPLOC4Q8TAT6 608 aa34.28■■■■□ 3.08
SYNGR1-202ENST00000318801 B4E1Z4 1266 aa34.27■■■■□ 3.08
SYNGR1-202ENST00000318801 BMP2KLQ5H9B9 411 aa34.27■■■■□ 3.08
SYNGR1-202ENST00000318801 SHISA4Q96DD7 197 aa34.27■■■■□ 3.08
SYNGR1-202ENST00000318801 DDX11Q96FC9 970 aa34.27■■■■□ 3.08
SYNGR1-202ENST00000318801 UBAC1Q9BSL1 405 aa34.27■■■■□ 3.08
SYNGR1-202ENST00000318801 RAVER2Q9HCJ3 691 aaKnown RBP34.27■■■■□ 3.08
SYNGR1-202ENST00000318801 ZNF236Q9UL36 1845 aa34.27■■■■□ 3.08
SYNGR1-202ENST00000318801 CENPBP07199 599 aaPredicted RBP34.26■■■■□ 3.08
SYNGR1-202ENST00000318801 ZKSCAN3Q9BRR0 538 aa34.26■■■■□ 3.08
SYNGR1-202ENST00000318801 CRISPLD2Q9H0B8 497 aa34.26■■■■□ 3.08
SYNGR1-202ENST00000318801 ZSWIM5Q9P217 1185 aa34.26■■■■□ 3.08
SYNGR1-202ENST00000318801 MKI67P46013 3256 aaKnown RBP34.26■■■■□ 3.07
SYNGR1-202ENST00000318801 COBLO75128 1261 aa34.25■■■■□ 3.07
SYNGR1-202ENST00000318801 FARP2O94887 1054 aaPredicted RBP34.25■■■■□ 3.07
SYNGR1-202ENST00000318801 CASC1Q6TDU7 716 aa34.25■■■■□ 3.07
SYNGR1-202ENST00000318801 CHST13Q8NET6 341 aa34.25■■■■□ 3.07
SYNGR1-202ENST00000318801 ZSCAN10Q96SZ4 725 aaPredicted RBP34.25■■■■□ 3.07
SYNGR1-202ENST00000318801 PTH1RQ03431 593 aa34.24■■■■□ 3.07
SYNGR1-202ENST00000318801 ANKLE1Q8NAG6 615 aa34.24■■■■□ 3.07
SYNGR1-202ENST00000318801 KAT14Q9H8E8 782 aa34.24■■■■□ 3.07
SYNGR1-202ENST00000318801 FLRT1Q9NZU1 646 aa34.24■■■■□ 3.07
SYNGR1-202ENST00000318801 DIS3Q9Y2L1 958 aaKnown RBP34.24■■■■□ 3.07
SYNGR1-202ENST00000318801 CNGA1P29973 690 aa34.23■■■■□ 3.07
SYNGR1-202ENST00000318801 HTATIP2Q9BUP3 242 aa34.23■■■■□ 3.07
SYNGR1-202ENST00000318801 PRR12Q9ULL5 1215 aa34.23■■■■□ 3.07
SYNGR1-202ENST00000318801 MSCO60682 206 aa34.23■■■■□ 3.07
SYNGR1-202ENST00000318801 CYP2C19P33261 490 aa34.23■■■■□ 3.07
SYNGR1-202ENST00000318801 TKFCQ3LXA3 575 aa34.22■■■■□ 3.07
SYNGR1-202ENST00000318801 RALYLQ86SE5 291 aaKnown RBP34.22■■■■□ 3.07
SYNGR1-202ENST00000318801 ANKRD35Q8N283 1001 aa34.22■■■■□ 3.07
SYNGR1-202ENST00000318801 MAP4K1Q92918 833 aa34.22■■■■□ 3.07
SYNGR1-202ENST00000318801 MAML3Q96JK9 1138 aa34.22■■■■□ 3.07
SYNGR1-202ENST00000318801 RIPK3Q9Y572 518 aa34.22■■■■□ 3.07
SYNGR1-202ENST00000318801 PGK2P07205 417 aa34.21■■■■□ 3.07
SYNGR1-202ENST00000318801 PDHBP11177 359 aa34.21■■■■□ 3.07
SYNGR1-202ENST00000318801 CCND3P30281 292 aaPredicted RBP34.21■■■■□ 3.07
SYNGR1-202ENST00000318801 GPATCH4Q5T3I0 446 aaKnown RBP34.21■■■■□ 3.07
SYNGR1-202ENST00000318801 ANKS1AQ92625 1134 aa34.21■■■■□ 3.07
SYNGR1-202ENST00000318801 GPCPD1Q9NPB8 672 aa34.21■■■■□ 3.07
SYNGR1-202ENST00000318801 PNMA2Q9UL42 364 aa34.21■■■■□ 3.07
SYNGR1-202ENST00000318801 BTNL9Q6UXG8 535 aa34.2■■■■□ 3.07
SYNGR1-202ENST00000318801 PNMA1Q8ND90 353 aa34.2■■■■□ 3.07
SYNGR1-202ENST00000318801 CYP21A2P08686 494 aa34.19■■■■□ 3.06
SYNGR1-202ENST00000318801 SYDE2Q5VT97 1194 aa34.19■■■■□ 3.06
SYNGR1-202ENST00000318801 NECAB2Q7Z6G3 386 aa34.19■■■■□ 3.06
SYNGR1-202ENST00000318801 HOMER2Q9NSB8 354 aa34.19■■■■□ 3.06
SYNGR1-202ENST00000318801 TNKSO95271 1327 aa34.18■■■■□ 3.06
SYNGR1-202ENST00000318801 FRMPD2Q68DX3 1309 aaPredicted RBP34.18■■■■□ 3.06
SYNGR1-202ENST00000318801 ERICH2A1L162 156 aa34.18■■■■□ 3.06
SYNGR1-202ENST00000318801 ZNF543Q08ER8 600 aa34.18■■■■□ 3.06
SYNGR1-202ENST00000318801 PRPF38BQ5VTL8 546 aaKnown RBP34.18■■■■□ 3.06
SYNGR1-202ENST00000318801 CCDC174Q6PII3 467 aa34.18■■■■□ 3.06
SYNGR1-202ENST00000318801 ENAHQ8N8S7 591 aaPredicted RBP34.18■■■■□ 3.06
SYNGR1-202ENST00000318801 NCOA7Q8NI08 942 aa34.18■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms