RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CNNM1Q9NRU3 951 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 AGPAT5Q9NUQ2 364 aa10.83□□□□□ -0.68
PTPRA-202ENST00000318266 ERICH2A1L162 156 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 MCM3P25205 808 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 KRT26Q7Z3Y9 468 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 IFNL3Q8IZI9 196 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 SECISBP2LQ93073 1101 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 CXorf56Q9H5V9 222 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 AATFQ9NY61 560 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 C4AP0C0L4 1744 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 C4BP0C0L5 1744 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 ITIH6Q6UXX5 1313 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 EIF3HO15372 352 aaKnown RBP eCLIP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 IPO7O95373 1038 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 TRIM21P19474 475 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 GPTP24298 496 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 PPFIA1Q13136 1202 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 PTGDRQ13258 359 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 MAGEB6Q8N7X4 407 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 MIGA1Q8NAN2 632 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 STRBPQ96SI9 672 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 CENPHQ9H3R5 247 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 LIMA1Q9UHB6 759 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 TBC1D2BQ9UPU7 963 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 KRT86O43790 486 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 SHOX2O60902 331 aaPredicted RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 ZPR1O75312 459 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 KRT14P02533 472 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 PARP1P09874 1014 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 PRCPP42785 496 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 CKAP4Q07065 602 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 WDR59Q6PJI9 974 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 FANCBQ8NB91 859 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 TSEN2Q8NCE0 465 aaKnown RBP10.82□□□□□ -0.68
PTPRA-202ENST00000318266 MTRQ99707 1265 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 GRIN2DO15399 1336 aa10.82□□□□□ -0.68
PTPRA-202ENST00000318266 B4DLN1 442 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 ERCC3P19447 782 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 FECHP22830 423 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 MCM7P33993 719 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 LIFRP42702 1097 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 PMS1P54277 932 aaKnown RBP10.81□□□□□ -0.68
PTPRA-202ENST00000318266 KCTD19Q17RG1 926 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-202ENST00000318266 CCDC96Q2M329 555 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 CT47A1Q5JQC4 288 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-202ENST00000318266 RNF187Q5TA31 235 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-202ENST00000318266 SH3RF1Q7Z6J0 888 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 CABLES1Q8TDN4 633 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
PTPRA-202ENST00000318266 STK36Q9NRP7 1315 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 MINDY4BA8MYZ0 360 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 ZNF654Q8IZM8 581 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 OTUD6BQ8N6M0 293 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 FAM184BQ9ULE4 1060 aa10.81□□□□□ -0.68
PTPRA-202ENST00000318266 SEMA3EO15041 775 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 KIAA0754O94854 1291 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 PAPD7Q5XG87 772 aaKnown RBP10.8□□□□□ -0.68
PTPRA-202ENST00000318266 CCDC70Q6NSX1 233 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 TEX2Q8IWB9 1127 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 SEPT12Q8IYM1 358 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 ANKRD13CQ8N6S4 541 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 DCAF5Q96JK2 942 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 UBAC1Q9BSL1 405 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 BAZ2BQ9UIF8 2168 aaKnown RBP10.8□□□□□ -0.68
PTPRA-202ENST00000318266 ESYT3A0FGR9 886 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 PLEKP08567 350 aaPredicted RBP10.8□□□□□ -0.68
PTPRA-202ENST00000318266 APBA1Q02410 837 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 TTMPQ5BVD1 217 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 MB21D1Q8N884 522 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 TRIM47Q96LD4 638 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 GREM2Q9H772 168 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 MLXIPQ9HAP2 919 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 CD248Q9HCU0 757 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 LRWD1Q9UFC0 647 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 RWDD2AQ9UIY3 292 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 MAP3K15Q6ZN16 1313 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 PARP4Q9UKK3 1724 aaKnown RBP10.8□□□□□ -0.68
PTPRA-202ENST00000318266 TARSL2A2RTX5 802 aaKnown RBP10.8□□□□□ -0.68
PTPRA-202ENST00000318266 PLEKHA8P1O95397 391 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 KRT2P35908 639 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 GUCY1A3Q02108 690 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 SPAG1Q07617 926 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 TRIM14Q14142 442 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 NFRKBQ6P4R8 1299 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 IRF2BP1Q8IU81 584 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 CEP89Q96ST8 783 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 NHEJ1Q9H9Q4 299 aaPredicted RBP10.8□□□□□ -0.68
PTPRA-202ENST00000318266 CAPN6Q9Y6Q1 641 aa10.8□□□□□ -0.68
PTPRA-202ENST00000318266 NCK2O43639 380 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 ITGA6P23229 1130 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 KRT83P78385 493 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 TTC38Q5R3I4 469 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 PIK3AP1Q6ZUJ8 805 aa10.79□□□□□ -0.68
PTPRA-202ENST00000318266 DHX37Q8IY37 1157 aaKnown RBP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
PTPRA-202ENST00000318266 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 1294.6 ms