RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 USP17L11C9JVI0 530 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USP17L18D6R9N7 530 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USP17L22D6RA61 530 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USP17L17D6RBQ6 530 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USP17L19D6RCP7 530 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USP17L20D6RJB6 530 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 TTLL1O95922 423 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 HLA-DOAP06340 250 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USP17L24Q0WX57 530 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 ARID5BQ14865 1188 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 DLGAP5Q15398 846 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USP17L6PQ6QN14 398 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 NIM1KQ8IY84 436 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 UPF1Q92900 1129 aaKnown RBP eCLIP8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 PDLIM2Q96JY6 352 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 TAOK3Q9H2K8 898 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 SUGT1Q9Y2Z0 365 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 A0A1W2PQ27 194 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 A0A1W2PQ64 194 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 A0A1W2PQD8 194 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 SMCO2A6NFE2 343 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 M0R2N6 131 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 PDIA4P13667 645 aaKnown RBP8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 PTPREP23469 700 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 RCAN1P53805 252 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 LETM2Q2VYF4 491 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 USH1GQ495M9 461 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 RTKN2Q8IZC4 609 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 AOPEPQ8N6M6 819 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 PPP1R9BQ96SB3 815 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 IDI2Q9BXS1 227 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 BLZF1Q9H2G9 400 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 BARHL2Q9NY43 387 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 PI4KBQ9UBF8 816 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 ZNRF3Q9ULT6 936 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 QSER1Q2KHR3 1735 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 ICA1Q05084 483 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 RILPL1Q5EBL4 403 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 DHX40Q8IX18 779 aaKnown RBP8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 PSMD1Q99460 953 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 ZNF541Q9H0D2 1346 aa8.01□□□□□ -1.13
LYSMD3-201ENST00000315948 ZBTB22O15209 634 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 ZNF543Q08ER8 600 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 FAM200AQ8TCP9 573 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 FBXO28Q9NVF7 368 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 KIAA1468Q9P260 1216 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 PCDHA5Q9Y5H7 936 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 ATP1A3P13637 1013 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 PRKG1Q13976 671 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 IQCB1Q15051 598 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
LYSMD3-201ENST00000315948 OGFOD1Q8N543 542 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 EEF2KMTQ96G04 330 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 MTRQ99707 1265 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 PCDHA4Q9UN74 947 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 PPP6R2O75170 966 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 POLD1P28340 1107 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 CCDC173Q0VFZ6 552 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 KARSQ15046 597 aaKnown RBP8□□□□□ -1.13
LYSMD3-201ENST00000315948 ABCB5Q2M3G0 1257 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 TRIM44Q96DX7 344 aaPredicted RBP8□□□□□ -1.13
LYSMD3-201ENST00000315948 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8□□□□□ -1.13
LYSMD3-201ENST00000315948 FOCADQ5VW36 1801 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 F5H6K3 240 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 RBAK-RBAKDNI3L0D1 243 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 TDP2O95551 362 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 XBP1P17861 261 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 SLC1A4P43007 532 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 NOVP48745 357 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 GMPSP49915 693 aaPredicted RBP8□□□□□ -1.13
LYSMD3-201ENST00000315948 KLRC3Q07444 240 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 CNNM3Q8NE01 707 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 TBC1D5Q92609 795 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 ZNF287Q9HBT7 754 aa8□□□□□ -1.13
LYSMD3-201ENST00000315948 SLC37A4O43826 429 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 NDUFB10O96000 172 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 IKQ13123 557 aaPredicted RBP7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 ATL3Q6DD88 541 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 MICALL2Q8IY33 904 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 C4orf32Q8N8J7 132 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 TBCKQ8TEA7 893 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 MAPK8IP1Q9UQF2 711 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 CCNT1O60563 726 aaKnown RBP7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 SNHG28P0DPA3 235 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 HOXA13P31271 388 aaPredicted RBP7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 LRMPQ12912 555 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 SLFN13Q68D06 897 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 TATDN1Q6P1N9 297 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 KRBA2Q6ZNG9 492 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 POTEDQ86YR6 584 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 SLC16A10Q8TF71 515 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 RRP36Q96EU6 259 aaKnown RBP7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 MED15Q96RN5 788 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 MYOZ2Q9NPC6 264 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 SRPRBQ9Y5M8 271 aaKnown RBP7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 CCDC194A0A1B0GVG4 234 aa7.99□□□□□ -1.13
LYSMD3-201ENST00000315948 ACTN4O43707 911 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms