RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 RASA1P20936 1047 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 CDC25BP30305 580 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 SLC16A2P36021 539 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 GJA10Q969M2 543 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 COA7Q96BR5 231 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 TMEM60Q9H2L4 133 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 TRIM66O15016 1216 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 GSDMDP57764 484 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 GSTO1P78417 241 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 PFKFB3Q16875 520 aaPredicted RBP11.42□□□□□ -0.58
FOXN4-201ENST00000299162 SLC35G1Q2M3R5 365 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 E4F1Q66K89 784 aaPredicted RBP11.42□□□□□ -0.58
FOXN4-201ENST00000299162 UBXN4Q92575 508 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 PIGSQ96S52 555 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 VPS16Q9H269 839 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 TRPC5Q9UL62 973 aaPredicted RBP11.42□□□□□ -0.58
FOXN4-201ENST00000299162 GDAQ9Y2T3 454 aa11.42□□□□□ -0.58
FOXN4-201ENST00000299162 CCNT1O60563 726 aaKnown RBP11.41□□□□□ -0.58
FOXN4-201ENST00000299162 STAT6P42226 847 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 MDM2Q00987 491 aaPredicted RBP11.41□□□□□ -0.58
FOXN4-201ENST00000299162 BMS1Q14692 1282 aaKnown RBP11.41□□□□□ -0.58
FOXN4-201ENST00000299162 IL17AQ16552 155 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 SHROOM1Q2M3G4 852 aaPredicted RBP11.41□□□□□ -0.58
FOXN4-201ENST00000299162 TEX35Q5T0J7 233 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 DPP8Q6V1X1 898 aaPredicted RBP11.41□□□□□ -0.58
FOXN4-201ENST00000299162 RTFDC1Q9BY42 306 aaPredicted RBP11.41□□□□□ -0.58
FOXN4-201ENST00000299162 ZNF446Q9NWS9 450 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 TMEM260Q9NX78 707 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 LRP5O75197 1615 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 LMAN1P49257 510 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 MED15Q96RN5 788 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 INTS13Q9NVM9 706 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 FLT1P17948 1338 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 APBA3O96018 575 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 NOP2P46087 812 aaKnown RBP11.41□□□□□ -0.58
FOXN4-201ENST00000299162 CLCN6P51797 869 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 RAD51AP2Q09MP3 1159 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 TXNRD1Q16881 649 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 CCDC96Q2M329 555 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 KRT27Q7Z3Y8 459 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 MAD2L2Q9UI95 211 aa11.41□□□□□ -0.58
FOXN4-201ENST00000299162 PARP1P09874 1014 aaKnown RBP11.4□□□□□ -0.58
FOXN4-201ENST00000299162 UBA7P41226 1012 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 SNAP25P60880 206 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 ERO1AQ96HE7 468 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 CACNA1SQ13698 1873 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 CHD4Q14839 1912 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 TRIM49BA6NDI0 452 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 PPEF1O14829 653 aaPredicted RBP11.4□□□□□ -0.58
FOXN4-201ENST00000299162 IKBKBO14920 756 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
FOXN4-201ENST00000299162 DPYDQ12882 1025 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 MTF1Q14872 753 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 HPS3Q969F9 1004 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 PPP1R13BQ96KQ4 1090 aa11.4□□□□□ -0.58
FOXN4-201ENST00000299162 SEC63Q9UGP8 760 aaKnown RBP11.4□□□□□ -0.58
FOXN4-201ENST00000299162 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.59
FOXN4-201ENST00000299162 NRAPQ86VF7 1730 aa11.4□□□□□ -0.59
FOXN4-201ENST00000299162 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 CBFA2T2O43439 604 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 MMP10P09238 476 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 TECP42680 631 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 SOGA3Q5TF21 947 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 KCTD1Q719H9 257 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 USP40Q9NVE5 1235 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 TAB2Q9NYJ8 693 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 MARCH6O60337 910 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 AKR1B1P15121 316 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 ATP2B4P23634 1241 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 TXKP42681 527 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 DTHD1Q6ZMT9 781 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 IQUBQ8NA54 791 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 CCDC150Q8NCX0 1101 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 TMX4Q9H1E5 349 aaPredicted RBP11.39□□□□□ -0.59
FOXN4-201ENST00000299162 EFCC1Q9HA90 598 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 LZTFL1Q9NQ48 299 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 DAGLAQ9Y4D2 1042 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 MYH15Q9Y2K3 1946 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 TAL1P17542 331 aaPredicted RBP11.39□□□□□ -0.59
FOXN4-201ENST00000299162 TXLNAP40222 546 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
FOXN4-201ENST00000299162 MORC3Q14149 939 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 PPP2R5BQ15173 497 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 EGFL6Q8IUX8 553 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 GPATCH11Q8N954 259 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 MLKLQ8NB16 471 aa11.39□□□□□ -0.59
FOXN4-201ENST00000299162 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
FOXN4-201ENST00000299162 COL22A1Q8NFW1 1626 aaPredicted RBP11.39□□□□□ -0.59
FOXN4-201ENST00000299162 IRF6O14896 467 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 NEMFO60524 1076 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 TNNI2P48788 182 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 NFIAQ12857 509 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 CCDC178Q5BJE1 867 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 TTBK2Q6IQ55 1244 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 PROM2Q8N271 834 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 BPIFA3Q9BQP9 254 aa11.38□□□□□ -0.59
FOXN4-201ENST00000299162 IRX2Q9BZI1 471 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms