RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CFAP61Q8NHU2 1237 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 PRPF31Q8WWY3 499 aaKnown RBP17.72■□□□□ 0.43
SSRP1-202ENST00000293880 ANKFY1Q9P2R3 1169 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 EYA2O00167 538 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 JDP2Q8WYK2 163 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 CARD10Q9BWT7 1032 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 GOLGA8HP0CJ92 632 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 LRRC8AQ8IWT6 810 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 PANK4Q9NVE7 773 aa17.72■□□□□ 0.43
SSRP1-202ENST00000293880 NSMCE1Q8WV22 266 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 NPATQ14207 1427 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 CCDC125Q86Z20 511 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 FIS1Q9Y3D6 152 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 LRRD1A4D1F6 860 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 SGSM2O43147 1006 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 IFNAR2P48551 515 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 PTH1RQ03431 593 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 SNX1Q13596 522 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 PPFIA2O75334 1257 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 ZBTB17Q13105 803 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 FAM133BQ5BKY9 247 aaKnown RBP17.71■□□□□ 0.43
SSRP1-202ENST00000293880 APPBP2Q92624 585 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 PPP1R13BQ96KQ4 1090 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 SLC39A2Q9NP94 309 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 PPP1R9AQ9ULJ8 1098 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 A0A1W2PP64 1363 aa17.71■□□□□ 0.43
SSRP1-202ENST00000293880 POC1B-GALNT4F8VUJ3 575 aa17.71■□□□□ 0.42
SSRP1-202ENST00000293880 JADE1Q6IE81 842 aa17.71■□□□□ 0.42
SSRP1-202ENST00000293880 BCAS4Q8TDM0 211 aa17.71■□□□□ 0.42
SSRP1-202ENST00000293880 METTL22Q9BUU2 404 aaPredicted RBP17.71■□□□□ 0.42
SSRP1-202ENST00000293880 ZNF215Q9UL58 517 aaPredicted RBP17.71■□□□□ 0.42
SSRP1-202ENST00000293880 WDR46O15213 610 aaKnown RBP17.7■□□□□ 0.42
SSRP1-202ENST00000293880 SLC1A4P43007 532 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 RASSF7Q02833 373 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 MMS19Q96T76 1030 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 CARD14Q9BXL6 1004 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 LGR6Q9HBX8 967 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 SMCO2A6NFE2 343 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 HIP1RO75146 1068 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 PPFIA4O75335 1185 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 TSTA3Q13630 321 aaPredicted RBP17.7■□□□□ 0.42
SSRP1-202ENST00000293880 SPOUT1Q5T280 376 aaKnown RBP17.7■□□□□ 0.42
SSRP1-202ENST00000293880 NSMFQ6X4W1 530 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 KRT25Q7Z3Z0 450 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 PARP2Q9UGN5 583 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 HYOU1Q9Y4L1 999 aa17.7■□□□□ 0.42
SSRP1-202ENST00000293880 GSTA1P08263 222 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 GSTA2P09210 222 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 INTUQ9ULD6 942 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 NDUFA8P51970 172 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 YARSP54577 528 aaKnown RBP17.69■□□□□ 0.42
SSRP1-202ENST00000293880 ANKRD13CQ8N6S4 541 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 K7ENM7 598 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 GUCY2DQ02846 1103 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 LLGL1Q15334 1064 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 KMT5BQ4FZB7 885 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 RASEFQ8IZ41 740 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 JPH2Q9BR39 696 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-202ENST00000293880 RIOK1Q9BRS2 568 aaKnown RBP17.69■□□□□ 0.42
SSRP1-202ENST00000293880 AZI2Q9H6S1 392 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 FLT4P35916 1363 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 FANCLQ9NW38 375 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 LRRC23Q53EV4 343 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-202ENST00000293880 CNBD1Q8NA66 436 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 RNF169Q8NCN4 708 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 ATP2A3Q93084 1043 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 EYA3Q99504 573 aa17.69■□□□□ 0.42
SSRP1-202ENST00000293880 DLATP10515 647 aaKnown RBP17.68■□□□□ 0.42
SSRP1-202ENST00000293880 ATF2P15336 505 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 PPARAQ07869 468 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 MMEL1Q495T6 779 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 NME8Q8N427 588 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 PLBD2Q8NHP8 589 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 TRIM56Q9BRZ2 755 aaKnown RBP17.68■□□□□ 0.42
SSRP1-202ENST00000293880 PCDH11XQ9BZA7 1347 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 PCDH11YQ9BZA8 1340 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 ZBBXA8MT70 800 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 APOEP02649 317 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 PHBP35232 272 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 TFAP4Q01664 338 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 SLC12A1Q13621 1099 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 TRAPPC3LQ5T215 181 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 TRIM50Q86XT4 487 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 GDAP1Q8TB36 358 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 THRAP3Q9Y2W1 955 aaKnown RBP17.68■□□□□ 0.42
SSRP1-202ENST00000293880 POLR3AO14802 1390 aaPredicted RBP17.68■□□□□ 0.42
SSRP1-202ENST00000293880 GGA1Q9UJY5 639 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 MAD1L1Q9Y6D9 718 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 TESPA1A2RU30 521 aaPredicted RBP17.68■□□□□ 0.42
SSRP1-202ENST00000293880 A1BGP04217 495 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 BRD3Q15059 726 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 P3H4Q92791 437 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 IFT88Q13099 833 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 GPHNQ9NQX3 736 aaPredicted RBP17.68■□□□□ 0.42
SSRP1-202ENST00000293880 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
SSRP1-202ENST00000293880 ZKSCAN8Q15776 578 aaPredicted RBP17.67■□□□□ 0.42
SSRP1-202ENST00000293880 SH2D4AQ9H788 454 aa17.67■□□□□ 0.42
SSRP1-202ENST00000293880 CACYBPQ9HB71 228 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms