RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 VIMP08670 466 aaKnown RBP14.13□□□□□ -0.15
PTCD1-201ENST00000292478 DCUN1D2Q6PH85 259 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 ANAPC4Q9UJX5 808 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 COL4A3BPQ9Y5P4 624 aa14.13□□□□□ -0.15
PTCD1-201ENST00000292478 ARAP3Q8WWN8 1544 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 MYL1P05976 194 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 CYP21A2P08686 494 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 TECP42680 631 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 ADKP55263 362 aaKnown RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 MRPS9P82933 396 aaKnown RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 ASPRV1Q53RT3 343 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 LGSNQ5TDP6 509 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 GBP6Q6ZN66 633 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 FBXO11Q86XK2 927 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 CCDC117Q8IWD4 279 aaPredicted RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 NSUN7Q8NE18 718 aaKnown RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 PANK4Q9NVE7 773 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 PPP2R2CQ9Y2T4 447 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 CRKLP46109 303 aaKnown RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 CERKLQ49MI3 558 aaPredicted RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 GPATCH4Q5T3I0 446 aaKnown RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 CPXCR1Q8N123 301 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 ZFP91Q96JP5 570 aaPredicted RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 ARMCX3Q9UH62 379 aaPredicted RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 ASIC3Q9UHC3 531 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 DDX25Q9UHL0 483 aaKnown RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 NDUFAB1O14561 156 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 ADCK5Q3MIX3 580 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 APOA5Q6Q788 366 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 CLIC4Q9Y696 253 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 ABCC3O15438 1527 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 TMED8Q6PL24 325 aaPredicted RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 SLC17A8Q8NDX2 589 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 EFCAB8A8MWE9 144 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 C17orf53Q8N3J3 647 aaPredicted RBP14.12□□□□□ -0.15
PTCD1-201ENST00000292478 HEG1Q9ULI3 1381 aa14.12□□□□□ -0.15
PTCD1-201ENST00000292478 TCP1P17987 556 aaKnown RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 PPM1FP49593 454 aaPredicted RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 ETF1P62495 437 aaKnown RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 DCAF15Q66K64 600 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 ARL1P40616 181 aaPredicted RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 ERCC6LQ2NKX8 1250 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 UNC5CLQ8IV45 518 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 SYMPKQ92797 1274 aaKnown RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 CNKSR1Q969H4 720 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 PUS3Q9BZE2 481 aaKnown RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 PCDHA4Q9UN74 947 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 ERBB3P21860 1342 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 ADORA1P30542 326 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 HPDP32754 393 aaPredicted RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 GTF2A1P52655 376 aaPredicted RBP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 PTGDRQ13258 359 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 UBE2Q2Q8WVN8 375 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 TEKT3Q9BXF9 490 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTCD1-201ENST00000292478 MAP3K4Q9Y6R4 1608 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 TAF12Q16514 161 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 KLHL7Q8IXQ5 586 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 NLGN1Q8N2Q7 840 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 ZMYND15Q9H091 742 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 FANCLQ9NW38 375 aa14.11□□□□□ -0.15
PTCD1-201ENST00000292478 CCDC24Q8N4L8 307 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 PPFIBP2Q8ND30 876 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 MKRN1Q9UHC7 482 aaKnown RBP14.1□□□□□ -0.15
PTCD1-201ENST00000292478 RCOR1Q9UKL0 485 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 ARHGAP25P42331 645 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 PKP1Q13835 747 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 MAEAQ7L5Y9 396 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 CCDC105Q8IYK2 499 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 PSMD1Q99460 953 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 NLRC4Q9NPP4 1024 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 TLR7Q9NYK1 1049 aaKnown RBP14.1□□□□□ -0.15
PTCD1-201ENST00000292478 M0R2C6 588 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 CIB2O75838 187 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 PRR16Q569H4 304 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 DHTKD1Q96HY7 919 aaPredicted RBP14.1□□□□□ -0.15
PTCD1-201ENST00000292478 FAM184BQ9ULE4 1060 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 PPFIA4O75335 1185 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
PTCD1-201ENST00000292478 ICA1Q05084 483 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 DEPTORQ8TB45 409 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 TRIM6Q9C030 488 aaPredicted RBP14.1□□□□□ -0.15
PTCD1-201ENST00000292478 RASSF4Q9H2L5 321 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 PRR36Q9H6K5 1346 aa14.1□□□□□ -0.15
PTCD1-201ENST00000292478 GCFC2P16383 781 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 ITIH3Q06033 890 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 FAM26FQ5R3K3 315 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 SND1Q7KZF4 910 aaKnown RBP eCLIP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 CMTR1Q8N1G2 835 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 LARSQ9P2J5 1176 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 MYO1AQ9UBC5 1043 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 BZW2Q9Y6E2 419 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 CHD1O14646 1710 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 EEF1GP26641 437 aaKnown RBP14.09□□□□□ -0.15
PTCD1-201ENST00000292478 RAD51AP2Q09MP3 1159 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 SLFN13Q68D06 897 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 RETREG2Q8NC44 543 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 GRK7Q8WTQ7 553 aa14.09□□□□□ -0.15
PTCD1-201ENST00000292478 SOS2Q07890 1332 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms