RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 GDF15Q99988 308 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 SENP6Q9GZR1 1112 aaPredicted RBP11.34□□□□□ -0.59
HMHB1-201ENST00000289448 RWDD1Q9H446 243 aaPredicted RBP11.34□□□□□ -0.59
HMHB1-201ENST00000289448 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 HELLSQ9NRZ9 838 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 COL6A3P12111 3177 aa11.34□□□□□ -0.59
HMHB1-201ENST00000289448 SEPT4O43236 478 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 MSCO60682 206 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 FGAP02671 866 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 SLC3A2P08195 630 aaKnown RBP11.33□□□□□ -0.6
HMHB1-201ENST00000289448 NUCB1Q02818 461 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 NMIQ13287 307 aaPredicted RBP11.33□□□□□ -0.6
HMHB1-201ENST00000289448 KCTD2Q14681 263 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 ALX1Q15699 326 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 MCMDC2Q4G0Z9 681 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
HMHB1-201ENST00000289448 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 TEX13BQ9BXU2 312 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 SLC38A10Q9HBR0 1119 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 RAVER2Q9HCJ3 691 aaKnown RBP11.33□□□□□ -0.6
HMHB1-201ENST00000289448 SLC5A4Q9NY91 659 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 ANAPC4Q9UJX5 808 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 FEM1BQ9UK73 627 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 SYNPO2Q9UMS6 1093 aa11.33□□□□□ -0.6
HMHB1-201ENST00000289448 DNAJC25-GNG10A0A024R161 153 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 DNM1LO00429 736 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 SOX1O00570 391 aaPredicted RBP11.32□□□□□ -0.6
HMHB1-201ENST00000289448 ATP2A1O14983 1001 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 ZBED4O75132 1171 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 FGRP09769 529 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 HSPD1P10809 573 aaKnown RBP11.32□□□□□ -0.6
HMHB1-201ENST00000289448 BMP3P12645 472 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 MCCP23508 829 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 COPB2P35606 906 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 MAGEA10P43363 369 aaPredicted RBP11.32□□□□□ -0.6
HMHB1-201ENST00000289448 NOVP48745 357 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 ATN1P54259 1190 aaPredicted RBP11.32□□□□□ -0.6
HMHB1-201ENST00000289448 GMCL1Q96IK5 515 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 TINF2Q9BSI4 451 aa11.32□□□□□ -0.6
HMHB1-201ENST00000289448 DIS3Q9Y2L1 958 aaKnown RBP11.32□□□□□ -0.6
HMHB1-201ENST00000289448 ZNFX1Q9P2E3 1918 aaKnown RBP11.32□□□□□ -0.6
HMHB1-201ENST00000289448 SMCHD1A6NHR9 2005 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 FRMPD3Q5JV73 1810 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 TSPY2A6NKD2 308 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 TRIM6-TRIM34B2RNG4 842 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 ORC4O43929 436 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 RANBP6O60518 1105 aaKnown RBP11.31□□□□□ -0.6
HMHB1-201ENST00000289448 ZNF865P0CJ78 1059 aaPredicted RBP11.31□□□□□ -0.6
HMHB1-201ENST00000289448 BMP8BP34820 402 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 LRRC41Q15345 812 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 RILPL2Q969X0 211 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
HMHB1-201ENST00000289448 FGD4Q96M96 766 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 STX8Q9UNK0 236 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
HMHB1-201ENST00000289448 ZNF536O15090 1300 aa11.31□□□□□ -0.6
HMHB1-201ENST00000289448 A0A1W2PPC1 479 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 SNAI1O95863 264 aaPredicted RBP11.3□□□□□ -0.6
HMHB1-201ENST00000289448 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
HMHB1-201ENST00000289448 SDSP20132 328 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 SLC1A4P43007 532 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 SNAP25P60880 206 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 HAND2P61296 217 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 KCTD1Q719H9 257 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
HMHB1-201ENST00000289448 TICAM2Q86XR7 235 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 ARRDC4Q8NCT1 418 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 STAG1Q8WVM7 1258 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 DDX11Q96FC9 970 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 AGBL1Q96MI9 1066 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 NRBP1Q9UHY1 535 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 CCDC171Q6TFL3 1326 aa11.3□□□□□ -0.6
HMHB1-201ENST00000289448 PGK1P00558 417 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 ADCYAP1R1P41586 468 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 STAT2P52630 851 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 OAZ1P54368 228 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 RTP1P59025 263 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 MAMDC4Q6UXC1 1216 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 SLC39A5Q6ZMH5 540 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 TBC1D10CQ8IV04 446 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 FERMT2Q96AC1 680 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 XPNPEP3Q9NQH7 507 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 ISY1Q9ULR0 285 aaKnown RBP11.29□□□□□ -0.6
HMHB1-201ENST00000289448 MTMR7Q9Y216 660 aa11.29□□□□□ -0.6
HMHB1-201ENST00000289448 CTDP1Q9Y5B0 961 aaPredicted RBP11.29□□□□□ -0.6
HMHB1-201ENST00000289448 KBTBD13C9JR72 458 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 PLA2G6O60733 806 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 RARBP10826 455 aa11.28□□□□□ -0.6
HMHB1-201ENST00000289448 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
HMHB1-201ENST00000289448 CNTN2Q02246 1040 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms