RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SENP6Q9GZR1 1112 aaPredicted RBP10.81□□□□□ -0.68
TPM3-201ENST00000271850 ATP8A2Q9NTI2 1148 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 SWAP70Q9UH65 585 aa10.81□□□□□ -0.68
TPM3-201ENST00000271850 PRUNE2Q8WUY3 3088 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 DNM1LO00429 736 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 HRO43593 1189 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 EEF2P13639 858 aaKnown RBP10.8□□□□□ -0.68
TPM3-201ENST00000271850 ATP2B2Q01814 1243 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 UBE3CQ15386 1083 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 PPP4R3BQ5MIZ7 849 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 KCTD12Q96CX2 325 aaKnown RBP10.8□□□□□ -0.68
TPM3-201ENST00000271850 MAML3Q96JK9 1138 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 UBE2OQ9C0C9 1292 aaKnown RBP10.8□□□□□ -0.68
TPM3-201ENST00000271850 EPB41L4AQ9HCS5 686 aaPredicted RBP10.8□□□□□ -0.68
TPM3-201ENST00000271850 MTMR10Q9NXD2 777 aa10.8□□□□□ -0.68
TPM3-201ENST00000271850 SMCHD1A6NHR9 2005 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 HMMRO75330 724 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 FLOT1O75955 427 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 GLRX3O76003 335 aaKnown RBP10.79□□□□□ -0.68
TPM3-201ENST00000271850 PGK2P07205 417 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 TAL1P17542 331 aaPredicted RBP10.79□□□□□ -0.68
TPM3-201ENST00000271850 CNGA1P29973 690 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 RTP1P59025 263 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 SNX17Q15036 470 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 FAM47AQ5JRC9 791 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 OSBP2Q969R2 916 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 LENG1Q96BZ8 264 aaPredicted RBP10.79□□□□□ -0.68
TPM3-201ENST00000271850 STRBPQ96SI9 672 aaKnown RBP10.79□□□□□ -0.68
TPM3-201ENST00000271850 CWC22Q9HCG8 908 aaKnown RBP10.79□□□□□ -0.68
TPM3-201ENST00000271850 HOXC10Q9NYD6 342 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 ZNF214Q9UL59 606 aaPredicted RBP10.79□□□□□ -0.68
TPM3-201ENST00000271850 SLC4A4Q9Y6R1 1079 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 IVNS1ABPQ9Y6Y0 642 aa10.79□□□□□ -0.68
TPM3-201ENST00000271850 ZNFX1Q9P2E3 1918 aaKnown RBP10.79□□□□□ -0.68
TPM3-201ENST00000271850 ROBO3Q96MS0 1386 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 IGKV6D-41A0A0C4DH26 115 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 GSG1L2A8MUP6 293 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 WDR46O15213 610 aaKnown RBP10.78□□□□□ -0.68
TPM3-201ENST00000271850 SEPT4O43236 478 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 STRNO43815 780 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 RASA1P20936 1047 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 ITGB8P26012 769 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 PSEN2P49810 448 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 LRRC41Q15345 812 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 ZNF792Q3KQV3 632 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 DMRTA1Q5VZB9 504 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 DPP9Q86TI2 863 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 ABRAQ8N0Z2 381 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 MB21D1Q8N884 522 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 PTCD2Q8WV60 388 aaKnown RBP10.78□□□□□ -0.68
TPM3-201ENST00000271850 GUCD1Q96NT3 240 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 NUP88Q99567 741 aaPredicted RBP10.78□□□□□ -0.68
TPM3-201ENST00000271850 RCAN3Q9UKA8 241 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 PPP1R9AQ9ULJ8 1098 aa10.78□□□□□ -0.68
TPM3-201ENST00000271850 PLXNA1Q9UIW2 1896 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 TRIM43BA6NCK2 446 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 VWA5AO00534 786 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 MSCO60682 206 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 ZNF865P0CJ78 1059 aaPredicted RBP10.77□□□□□ -0.69
TPM3-201ENST00000271850 PLS1Q14651 629 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 TRIM60Q495X7 471 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 FAM83BQ5T0W9 1011 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 SLC39A5Q6ZMH5 540 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 NCAPG2Q86XI2 1143 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 RIOX2Q8IUF8 465 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 TRIM43Q96BQ3 446 aaPredicted RBP10.77□□□□□ -0.69
TPM3-201ENST00000271850 CCDC17Q96LX7 622 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 FGD4Q96M96 766 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 LRRCC1Q9C099 1032 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 MROH8Q9H579 483 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 ARHGEF10LQ9HCE6 1279 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 PDLIM7Q9NR12 457 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 RIPK3Q9Y572 518 aa10.77□□□□□ -0.69
TPM3-201ENST00000271850 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 M0R2C6 588 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 FOXP2O15409 715 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 MS4A1P11836 297 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 SBK1Q52WX2 424 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 STK11IPQ8N1F8 1099 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 SLC17A8Q8NDX2 589 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 OTUD7AQ8TE49 926 aaPredicted RBP10.76□□□□□ -0.69
TPM3-201ENST00000271850 KANSL2Q9H9L4 492 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 ATP11BQ9Y2G3 1177 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 STXBP5LQ9Y2K9 1186 aa10.76□□□□□ -0.69
TPM3-201ENST00000271850 ADCY6O43306 1168 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 ADAMTS4O75173 837 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 NDUFB10O96000 172 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 ADCYAP1R1P41586 468 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 EPHB4P54760 987 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 SHHQ15465 462 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 KBTBD3Q8NAB2 608 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 FERMT2Q96AC1 680 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 SEC62Q99442 399 aaKnown RBP10.75□□□□□ -0.69
TPM3-201ENST00000271850 MMP19Q99542 508 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.75□□□□□ -0.69
TPM3-201ENST00000271850 DCTPP1Q9H773 170 aa10.75□□□□□ -0.69
TPM3-201ENST00000271850 ECHDC1Q9NTX5 307 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms