RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 PHLPP2Q6ZVD8 1323 aa8.69□□□□□ -1.02
USP3-201ENST00000268049 A0A0G2JLW4 131 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CTAGE15A4D2H0 777 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CAVIN2O95810 425 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CTAGE8P0CG41 777 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 RARBP10826 455 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 FCER1AP12319 257 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 ADCY7P51828 1080 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CTAGE6Q86UF2 777 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CTAGE4Q8IX94 777 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 SEC31BQ9NQW1 1179 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 DDX19AQ9NUU7 478 aaKnown RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 DENND3A2RUS2 1198 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 SKILP12757 684 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 GYG1P46976 350 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 PPP2R5DQ14738 602 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 DNAJC21Q5F1R6 531 aaKnown RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 CHADLQ6NUI6 762 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 HAUS6Q7Z4H7 955 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CNOT7Q9UIV1 285 aaKnown RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 IBTKQ9P2D0 1353 aaPredicted RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 IGHDP01880 384 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 RPL13P26373 211 aaKnown RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 POLR2BP30876 1174 aaKnown RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 BIRC3Q13489 604 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 INF2Q27J81 1249 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CC2D1AQ6P1N0 951 aaPredicted RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 B4GALNT4Q76KP1 1039 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 SPATS2LQ9NUQ6 558 aaKnown RBP8.68□□□□□ -1.02
USP3-201ENST00000268049 KIF1AQ12756 1690 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CCL15-CCL14A0A0B4J2E2 113 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 PPP2R5AQ15172 486 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 CCL15Q16663 113 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 MIS18BP1Q6P0N0 1132 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 SEPT14Q6ZU15 432 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 SND1Q7KZF4 910 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP3-201ENST00000268049 MMP19Q99542 508 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 STIM2Q9P246 746 aa8.68□□□□□ -1.02
USP3-201ENST00000268049 USO1O60763 962 aaKnown RBP8.67□□□□□ -1.02
USP3-201ENST00000268049 FKTNO75072 461 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 RGS2P41220 211 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 INHBEP58166 350 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 NOGQ13253 232 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 CCDC186Q7Z3E2 898 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 MIER3Q7Z3K6 550 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 PI4KBQ9UBF8 816 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 PNMA6EA0A0J9YXQ4 647 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 CARNS1A5YM72 827 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 BUB1BO60566 1050 aaPredicted RBP8.67□□□□□ -1.02
USP3-201ENST00000268049 ZNF165P49910 485 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 LACTBP83111 547 aaPredicted RBP8.67□□□□□ -1.02
USP3-201ENST00000268049 PTGDRQ13258 359 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 BMP2KLQ5H9B9 411 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 AMNQ9BXJ7 453 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 ABL1P00519 1130 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 CKAP4Q07065 602 aaKnown RBP8.67□□□□□ -1.02
USP3-201ENST00000268049 ARMCX5Q6P1M9 558 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 ANKRD13AQ8IZ07 590 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 AKT3Q9Y243 479 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 CNTNAP4Q9C0A0 1308 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 TUBB4BP68371 445 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 STX1AQ16623 288 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 COL5A2P05997 1499 aaPredicted RBP8.67□□□□□ -1.02
USP3-201ENST00000268049 NDC80O14777 642 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 PDE8BO95263 885 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 DPEP1P16444 411 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 PCK1P35558 622 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 GABPAQ06546 454 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 ITPK1Q13572 414 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 PPP2R5BQ15173 497 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 WHAMMP3Q1A5X7 153 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 SMIM5Q71RC9 77 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 PPFIBP2Q8ND30 876 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 FAM76AQ8TAV0 307 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 PCDHA1Q9Y5I3 950 aa8.67□□□□□ -1.02
USP3-201ENST00000268049 GSTTP1A0A1W2PQM5 241 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 DGKZQ13574 1117 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 CUL4BQ13620 913 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 CCDC77Q9BR77 488 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 G3BP2Q9UN86 482 aaKnown RBP8.66□□□□□ -1.02
USP3-201ENST00000268049 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.66□□□□□ -1.02
USP3-201ENST00000268049 MTIF2P46199 727 aaKnown RBP8.66□□□□□ -1.02
USP3-201ENST00000268049 AOC3Q16853 763 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 USH1GQ495M9 461 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 LRRC24Q50LG9 513 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 FBXO11Q86XK2 927 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 BBS5Q8N3I7 341 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 RDH13Q8NBN7 331 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 CTNNBL1Q8WYA6 563 aaPredicted RBP8.66□□□□□ -1.02
USP3-201ENST00000268049 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 ABCC4O15439 1325 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 CSPG5O95196 566 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 SDSP20132 328 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 HDXQ7Z353 690 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 NEK1Q96PY6 1258 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 KANSL2Q9H9L4 492 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 ATP8A2Q9NTI2 1148 aa8.66□□□□□ -1.02
USP3-201ENST00000268049 SLC12A6Q9UHW9 1150 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms