RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZNF219Q9P2Y4 722 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 RCOR1Q9UKL0 485 aa6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 DHX40Q8IX18 779 aaKnown RBP6.74□□□□□ -1.33
TOPBP1-201ENST00000260810 TFRCP02786 760 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 ITGB3BPQ13352 177 aaPredicted RBP6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 SEPT2Q15019 361 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 IFNAR1P17181 557 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 GJB2P29033 226 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 PBX1P40424 430 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 IARSP41252 1262 aaKnown RBP6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 GIMAP6Q6P9H5 292 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 C11orf57Q6ZUT1 292 aaPredicted RBP6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 HPS3Q969F9 1004 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 NEK1Q96PY6 1258 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 MYOZ2Q9NPC6 264 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 GRIN2DO15399 1336 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 IGF2BP3O00425 579 aaKnown RBP eCLIP6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 PCDHA6Q9UN73 950 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 PCDHA8Q9Y5H6 950 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 TRAF7Q6Q0C0 670 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 TRPV1Q8NER1 839 aa6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 RRAGDQ9NQL2 400 aaPredicted RBP6.73□□□□□ -1.33
TOPBP1-201ENST00000260810 CLRN2A0PK11 232 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 EPHB6O15197 1021 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 TBC1D12O60347 775 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 CCDC144BQ3MJ40 725 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 SLC16A10Q8TF71 515 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 PRC1O43663 620 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 PODNQ7Z5L7 613 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 EPSTI1Q96J88 318 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 PCDHA7Q9UN72 937 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 KIAA0100Q14667 2235 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 PTPDC1A2A3K4 754 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 APBA1Q02410 837 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 MIGA2Q7L4E1 593 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 CHMP4CQ96CF2 233 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 HACL1Q9UJ83 578 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 UGCGQ16739 394 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 FUBP1Q96AE4 644 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 DNAJC19Q96DA6 116 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 NFIBO00712 420 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 IRF6O14896 467 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 ZNF862O60290 1169 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 ZPR1O75312 459 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 IDH1O75874 414 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 CCNE2O96020 404 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 SLC16A2P36021 539 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 TMEM132BQ14DG7 1078 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 C7orf31Q8N865 590 aa6.72□□□□□ -1.33
TOPBP1-201ENST00000260810 F8W031 263 aaPredicted RBP6.71□□□□□ -1.33
TOPBP1-201ENST00000260810 ZMYND12Q9H0C1 365 aa6.71□□□□□ -1.33
TOPBP1-201ENST00000260810 KCNMB3Q9NPA1 279 aa6.71□□□□□ -1.33
TOPBP1-201ENST00000260810 HOXC8P31273 242 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 NDUFA8P51970 172 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 HAP1P54257 671 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 CUL4BQ13620 913 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 CFAP100Q494V2 611 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 LONRF3Q496Y0 759 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 ZCWPW2Q504Y3 356 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 IGSF22Q8N9C0 903 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 LRRN4CLQ8ND94 238 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 RBPJLQ9UBG7 517 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 SEMA3EO15041 775 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 GDF11O95390 407 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 PTPRAP18433 802 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 CYP7A1P22680 504 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 NEXNQ0ZGT2 675 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 TTLL6Q8N841 843 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 ADAM33Q9BZ11 813 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 GPR88Q9GZN0 384 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 UBA5Q9GZZ9 404 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 NENFQ9UMX5 172 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 MUC22E2RYF6 1773 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 LRRK1Q38SD2 2015 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L10C9JJH3 530 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 EEF2P13639 858 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 G3BP1Q13283 466 aaKnown RBP eCLIP6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 SPECC1Q5M775 1068 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 LEO1Q8WVC0 666 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 MYO7AQ13402 2215 aa6.71□□□□□ -1.34
TOPBP1-201ENST00000260810 FMNL1O95466 1100 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 STK3Q13188 491 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 FERMT3Q86UX7 667 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ZNF654Q8IZM8 581 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 MPNDQ8N594 471 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ARHGAP39Q9C0H5 1083 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 COBLO75128 1261 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 NDUFB10O96000 172 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 MMP1P03956 469 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ZNF543Q08ER8 600 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 TCP10Q12799 353 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ZSCAN10Q96SZ4 725 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 F13A1P00488 732 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ZNF18P17022 549 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 ATP2B4P23634 1241 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 DRP2Q13474 957 aa6.7□□□□□ -1.34
TOPBP1-201ENST00000260810 GRM4Q14833 912 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms