RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 SULF1Q8IWU6 871 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 MYOCDQ8IZQ8 938 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 IPO4Q8TEX9 1081 aaKnown RBP9.62□□□□□ -0.87
PTCD3-201ENST00000254630 ERO1AQ96HE7 468 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 RAB20Q9NX57 234 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 LOC102724428A0A0B4J2F2 783 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 H0YCG3 227 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 SCG2P13521 617 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 PFKFB1P16118 471 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 SIK1P57059 783 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 FAM173BQ6P4H8 233 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 KRT26Q7Z3Y9 468 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 RDH13Q8NBN7 331 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 U2AF1L4Q8WU68 220 aaKnown RBP9.62□□□□□ -0.87
PTCD3-201ENST00000254630 PNMA2Q9UL42 364 aa9.62□□□□□ -0.87
PTCD3-201ENST00000254630 TNKSO95271 1327 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 HSPD1P10809 573 aaKnown RBP9.61□□□□□ -0.87
PTCD3-201ENST00000254630 MNAT1P51948 309 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 PNMA1Q8ND90 353 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 MAP3K4Q9Y6R4 1608 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 USP6P35125 1406 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 PLA2G4DQ86XP0 818 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 CCDC110Q8TBZ0 833 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 FAM193BQ96PV7 902 aaPredicted RBP9.61□□□□□ -0.87
PTCD3-201ENST00000254630 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 TRIM31Q9BZY9 425 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 SEMA3EO15041 775 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 TRIM37O94972 964 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 GSPT1P15170 499 aaKnown RBP9.61□□□□□ -0.87
PTCD3-201ENST00000254630 CCND2P30279 289 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 PDE6CP51160 858 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 POLGP54098 1239 aaPredicted RBP9.61□□□□□ -0.87
PTCD3-201ENST00000254630 LONRF2Q1L5Z9 754 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 CASC4Q6P4E1 433 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 PEX26Q7Z412 305 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 ANKRD35Q8N283 1001 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 SSH3Q8TE77 659 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 STAMQ92783 540 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 LEMD3Q9Y2U8 911 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 ADORA1P30542 326 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 CCDC94Q9BW85 323 aaPredicted RBP9.61□□□□□ -0.87
PTCD3-201ENST00000254630 PRDM15P57071 1507 aaPredicted RBP9.61□□□□□ -0.87
PTCD3-201ENST00000254630 PCP11498 1178 aaKnown RBP9.61□□□□□ -0.87
PTCD3-201ENST00000254630 RPS6KA1Q15418 735 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 SLFN13Q68D06 897 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 RSAD2Q8WXG1 361 aa9.61□□□□□ -0.87
PTCD3-201ENST00000254630 TMEM232C9JQI7 657 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 SESTD1Q86VW0 696 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 MMS19Q96T76 1030 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 THRAP3Q9Y2W1 955 aaKnown RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 NFE2L3Q9Y4A8 694 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 FAM170AA1A519 330 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 KLRF2D3W0D1 207 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 EBAG9O00559 213 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 OATP04181 439 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 XRCC5P13010 732 aaKnown RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 RXRBP28702 533 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 CCDC105Q8IYK2 499 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 FANCBQ8NB91 859 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 HSPA1LP34931 641 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 RNF169Q8NCN4 708 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 STMN2Q93045 179 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 PARP2Q9UGN5 583 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 MKRN1Q9UHC7 482 aaKnown RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 SEPT9Q9UHD8 586 aaPredicted RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 TTLL3Q9Y4R7 772 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 LAMC1P11047 1609 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 IQGAP3Q86VI3 1631 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 TBC1D8O95759 1140 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 RPN1P04843 607 aaKnown RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 MAGEA1P43355 309 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 IGBP1P78318 339 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 CFAP221Q4G0U5 840 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 MIS18BP1Q6P0N0 1132 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 SLF1Q9BQI6 1058 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 FAM207AQ9NSI2 230 aaPredicted RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 ZHX1Q9UKY1 873 aaPredicted RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 LACTBP83111 547 aaPredicted RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 ATP11AP98196 1134 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 TFDP1Q14186 410 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 NLGN1Q8N2Q7 840 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 GSDMBQ8TAX9 411 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 ZSWIM6Q9HCJ5 1215 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 NRBP2Q9NSY0 501 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 AMFRQ9UKV5 643 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 PCDHA12Q9UN75 941 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 MAGI2Q86UL8 1455 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 USP14P54578 494 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 ADALQ6DHV7 355 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 TRIM50Q86XT4 487 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 IFIH1Q9BYX4 1025 aaKnown RBP9.6□□□□□ -0.87
PTCD3-201ENST00000254630 C1orf112Q9NSG2 853 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 OGFRQ9NZT2 677 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 SEPT10Q9P0V9 454 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 STIM2Q9P246 746 aa9.6□□□□□ -0.87
PTCD3-201ENST00000254630 RGS12O14924 1447 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 CLRN2A0PK11 232 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms