RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 MCTP2Q6DN12 878 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 KANK3Q6NY19 840 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 TMTC2Q8N394 836 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 GOLGA1Q92805 767 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 JPH2Q9BR39 696 aaPredicted RBP10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 RNF26Q9BY78 433 aaPredicted RBP10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 BAZ2AQ9UIF9 1905 aaKnown RBP10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 GOLGA6L9A6NEM1 432 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 CCDC175P0C221 793 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 KRT2P35908 639 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 NPY5RQ15761 445 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 KIF4BQ2VIQ3 1234 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 GPR161Q8N6U8 529 aaKnown RBP10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 ERLIN2O94905 339 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 PBX1P40424 430 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 PTGDRQ13258 359 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 FKBP15Q5T1M5 1219 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 ACRBPQ8NEB7 543 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 ESR2Q92731 530 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 ZSCAN10Q96SZ4 725 aaPredicted RBP10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 MAPK8IP1Q9UQF2 711 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 MYH8P13535 1937 aa10.6□□□□□ -0.71
HLA-DOA-201ENST00000229829 MAGEB6P1A0A0J9YX57 407 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 GYPCP04921 128 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 RDXP35241 583 aaKnown RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 CCT5P48643 541 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 EIF5P55010 431 aaKnown RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 CDKAL1Q5VV42 579 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 PPFIBP1Q86W92 1011 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 ZNF384Q8TF68 577 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 SMARCC1Q92922 1105 aaPredicted RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 ZNF622Q969S3 477 aaKnown RBP eCLIP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 MTRQ99707 1265 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 FAM204AQ9H8W3 233 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 CTNND2Q9UQB3 1225 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 IGHMBP2P38935 993 aaKnown RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 TROAPQ12815 778 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 SLC4A8Q2Y0W8 1093 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 IFIT1BQ5T764 474 aaKnown RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 INTS5Q6P9B9 1019 aaKnown RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 MMS22LQ6ZRQ5 1243 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 CDC5LQ99459 802 aaKnown RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 RIOK1Q9BRS2 568 aaKnown RBP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 VPS16Q9H269 839 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 XDHP47989 1333 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 ERLIN1O75477 346 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 IL17AQ16552 155 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 ZNF569Q5MCW4 686 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 RPAINQ86UA6 219 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 UPF1Q92900 1129 aaKnown RBP eCLIP10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 FUT8Q9BYC5 575 aa10.59□□□□□ -0.71
HLA-DOA-201ENST00000229829 AFF2P51816 1311 aa10.58□□□□□ -0.71
HLA-DOA-201ENST00000229829 PLSCR1O15162 318 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 MFAP3LO75121 409 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 UBXN6Q9BZV1 441 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 TAF1P21675 1872 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 PRPF3O43395 683 aaKnown RBP10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 CHMP4BP1P59074 171 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 CCDC152Q4G0S7 254 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 FAM47AQ5JRC9 791 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 TTC38Q5R3I4 469 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 GBP6Q6ZN66 633 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 C3orf67Q6ZVT6 689 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 SRBD1Q8N5C6 995 aaKnown RBP10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 RABGGTAQ92696 567 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 TNFRSF25Q93038 417 aa10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 NIP7Q9Y221 180 aaKnown RBP eCLIP10.58□□□□□ -0.72
HLA-DOA-201ENST00000229829 SSBP05455 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 XBP1P17861 261 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 ERVK-24P63145 666 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 KRT31Q15323 416 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 PIK3AP1Q6ZUJ8 805 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 CATIPQ7Z7H3 387 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 TADA2BQ86TJ2 420 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 ACSBG1Q96GR2 724 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 GJD4Q96KN9 370 aaPredicted RBP10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 POLD4Q9HCU8 107 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 COL1A1P02452 1464 aaPredicted RBP10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 USP17L12C9JPN9 530 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 USP17L21D6R901 530 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 NEBLO76041 1014 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 MCM7P33993 719 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 RRAGBQ5VZM2 374 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 HDXQ7Z353 690 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 RIN2Q8WYP3 895 aaPredicted RBP10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 GSDMAQ96QA5 445 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 ANKZF1Q9H8Y5 726 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 ABCB6Q9NP58 842 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 TAB2Q9NYJ8 693 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 ANAPC4Q9UJX5 808 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 SAMM50Q9Y512 469 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 EXOC5O00471 708 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 TXLNAP40222 546 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 CRKLP46109 303 aaKnown RBP10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 RASGRP2Q7LDG7 609 aa10.57□□□□□ -0.72
HLA-DOA-201ENST00000229829 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms