RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
NEFM-201ENST00000221166 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
NEFM-201ENST00000221166 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 H7C1D1 291 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 KRT86O43790 486 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 SSBP05455 408 aaKnown RBP eCLIP12.54□□□□□ -0.4
NEFM-201ENST00000221166 TSPY3P0CV98 308 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 TSPY8P0CW00 308 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 RAD51AP2Q09MP3 1159 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 TRIM14Q14142 442 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 SAR1BQ9Y6B6 198 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 MMRN2Q9H8L6 949 aa12.54□□□□□ -0.4
NEFM-201ENST00000221166 DDAH1O94760 285 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 PRDX5P30044 214 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 KRT83P78385 493 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 MECOMQ03112 1051 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 DDB1Q16531 1140 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 PNMA1Q8ND90 353 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 CCDC42Q96M95 316 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 UIMC1Q96RL1 719 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 SIPA1L3O60292 1781 aaPredicted RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 LOC102724428A0A0B4J2F2 783 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 HIBADHP31937 336 aaKnown RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 NAPAP54920 295 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 SIK1P57059 783 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 TUBB2AQ13885 445 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 BEND6Q5SZJ8 279 aaPredicted RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 GSPT2Q8IYD1 628 aaKnown RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 STAG2Q8N3U4 1231 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 TUBB2BQ9BVA1 445 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 SEMA3EO15041 775 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 MAP9Q49MG5 647 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 MB21D1Q8N884 522 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 SPATA20Q8TB22 786 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 ANKIB1Q9P2G1 1089 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 LIMA1Q9UHB6 759 aaKnown RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 AKR1B10O60218 316 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 APTXQ7Z2E3 356 aaKnown RBP12.53□□□□□ -0.4
NEFM-201ENST00000221166 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 EXOC4Q96A65 974 aa12.53□□□□□ -0.4
NEFM-201ENST00000221166 COL5A2P05997 1499 aaPredicted RBP12.52□□□□□ -0.4
NEFM-201ENST00000221166 USP17L3A6NCW0 530 aa12.52□□□□□ -0.4
NEFM-201ENST00000221166 USP17L4A6NCW7 530 aa12.52□□□□□ -0.4
NEFM-201ENST00000221166 CCNT1O60563 726 aaKnown RBP12.52□□□□□ -0.4
NEFM-201ENST00000221166 CT47A1Q5JQC4 288 aaPredicted RBP12.52□□□□□ -0.4
NEFM-201ENST00000221166 USP17L1Q7RTZ2 530 aa12.52□□□□□ -0.4
NEFM-201ENST00000221166 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.4
NEFM-201ENST00000221166 RIOK1Q9BRS2 568 aaKnown RBP12.52□□□□□ -0.4
NEFM-201ENST00000221166 TUBGCP2Q9BSJ2 902 aa12.52□□□□□ -0.4
NEFM-201ENST00000221166 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 ATP1A1P05023 1023 aaKnown RBP12.52□□□□□ -0.41
NEFM-201ENST00000221166 KLRK1P26718 216 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 LONP1P36776 959 aaKnown RBP12.52□□□□□ -0.41
NEFM-201ENST00000221166 DNAJC21Q5F1R6 531 aaKnown RBP12.52□□□□□ -0.41
NEFM-201ENST00000221166 FAM84BQ96KN1 310 aaPredicted RBP12.52□□□□□ -0.41
NEFM-201ENST00000221166 FAM207AQ9NSI2 230 aaPredicted RBP12.52□□□□□ -0.41
NEFM-201ENST00000221166 ATRNO75882 1429 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 ACTN2P35609 894 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 KLK7P49862 253 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 RCAN1P53805 252 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 ANKRD13CQ8N6S4 541 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 RUFY1Q96T51 708 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 HAUS4Q9H6D7 363 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 DCP1AQ9NPI6 582 aaPredicted RBP12.52□□□□□ -0.41
NEFM-201ENST00000221166 DISC1Q9NRI5 854 aa12.52□□□□□ -0.41
NEFM-201ENST00000221166 KCPQ6ZWJ8 1503 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 CNTNAP5Q8WYK1 1306 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
NEFM-201ENST00000221166 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 DYMQ7RTS9 669 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 CABP7Q86V35 215 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 HPS3Q969F9 1004 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 MTA3Q9BTC8 594 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 BRIP1Q9BX63 1249 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 FAM204AQ9H8W3 233 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 AGPAT5Q9NUQ2 364 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
NEFM-201ENST00000221166 TECP42680 631 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 PMS1P54277 932 aaKnown RBP12.51□□□□□ -0.41
NEFM-201ENST00000221166 UBE4AQ14139 1066 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 IL17AQ16552 155 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
NEFM-201ENST00000221166 TMEM60Q9H2L4 133 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 ZHX3Q9H4I2 956 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 TRIM66O15016 1216 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 ZNF185O15231 689 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
NEFM-201ENST00000221166 TXKP42681 527 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 PDXDC2PQ6P474 469 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 C3orf67Q6ZVT6 689 aa12.51□□□□□ -0.41
NEFM-201ENST00000221166 NBPF5PQ86XG9 351 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms