RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 RIPK3Q9Y572 518 aa17.86■□□□□ 0.45
UPK3A-201ENST00000216211 TTLL1O95922 423 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 TSPY3P0CV98 308 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 TSPY8P0CW00 308 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 TAL1P17542 331 aaPredicted RBP17.85■□□□□ 0.45
UPK3A-201ENST00000216211 PPARAQ07869 468 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 LRRC41Q15345 812 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 SLC39A5Q6ZMH5 540 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 CPXCR1Q8N123 301 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 PLIN4Q96Q06 1357 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 TEX13BQ9BXU2 312 aa17.85■□□□□ 0.45
UPK3A-201ENST00000216211 DIS3Q9Y2L1 958 aaKnown RBP17.85■□□□□ 0.45
UPK3A-201ENST00000216211 CTDP1Q9Y5B0 961 aaPredicted RBP17.85■□□□□ 0.45
UPK3A-201ENST00000216211 TFAP4Q01664 338 aa17.84■□□□□ 0.45
UPK3A-201ENST00000216211 LRIT3Q3SXY7 679 aa17.84■□□□□ 0.45
UPK3A-201ENST00000216211 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
UPK3A-201ENST00000216211 NEDD1Q8NHV4 660 aa17.84■□□□□ 0.45
UPK3A-201ENST00000216211 FERMT2Q96AC1 680 aa17.84■□□□□ 0.45
UPK3A-201ENST00000216211 ZBTB47Q9UFB7 747 aaPredicted RBP17.84■□□□□ 0.45
UPK3A-201ENST00000216211 FOXP2O15409 715 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 ZBED4O75132 1171 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.44
UPK3A-201ENST00000216211 ADCYAP1R1P41586 468 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 SLFN13Q68D06 897 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 GMCL1P1Q8NEA9 526 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 RAVER2Q9HCJ3 691 aaKnown RBP17.83■□□□□ 0.44
UPK3A-201ENST00000216211 XPNPEP3Q9NQH7 507 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 NRBP1Q9UHY1 535 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 FEM1BQ9UK73 627 aa17.83■□□□□ 0.44
UPK3A-201ENST00000216211 COL6A3P12111 3177 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 ZNF865P0CJ78 1059 aaPredicted RBP17.82■□□□□ 0.44
UPK3A-201ENST00000216211 RARBP10826 455 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 CTDSPL2Q05D32 466 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 TRIM60Q495X7 471 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 LENG1Q96BZ8 264 aaPredicted RBP17.82■□□□□ 0.44
UPK3A-201ENST00000216211 CHMP4CQ96CF2 233 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 DDX11Q96FC9 970 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 LBHD1Q9BQE6 289 aaPredicted RBP17.82■□□□□ 0.44
UPK3A-201ENST00000216211 SLC38A10Q9HBR0 1119 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 INCENPQ9NQS7 918 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 PRKAG2Q9UGJ0 569 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 SYNPO2Q9UMS6 1093 aa17.82■□□□□ 0.44
UPK3A-201ENST00000216211 ATP2A1O14983 1001 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 PGK1P00558 417 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 BMP3P12645 472 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 AKR1A1P14550 325 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 SNX17Q15036 470 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 VPS53Q5VIR6 699 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 Q7L0L9 218 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 PRDM5Q9NQX1 630 aaPredicted RBP17.81■□□□□ 0.44
UPK3A-201ENST00000216211 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
UPK3A-201ENST00000216211 CNPY2Q9Y2B0 182 aa17.81■□□□□ 0.44
UPK3A-201ENST00000216211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.81■□□□□ 0.44
UPK3A-201ENST00000216211 LAMA2P24043 3122 aaKnown RBP17.81■□□□□ 0.44
UPK3A-201ENST00000216211 DNAJC25-GNG10A0A024R161 153 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 TMEM232C9JQI7 657 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 GPR153Q6NV75 609 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 RNF180Q86T96 592 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 DEFB123Q8N688 67 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 PHF24Q9UPV7 400 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 TACC3Q9Y6A5 838 aa17.8■□□□□ 0.44
UPK3A-201ENST00000216211 SYNGAP1Q96PV0 1343 aa17.79■□□□□ 0.44
UPK3A-201ENST00000216211 TSPY2A6NKD2 308 aa17.79■□□□□ 0.44
UPK3A-201ENST00000216211 SNAI1O95863 264 aaPredicted RBP17.79■□□□□ 0.44
UPK3A-201ENST00000216211 PDE1AP54750 535 aa17.79■□□□□ 0.44
UPK3A-201ENST00000216211 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
UPK3A-201ENST00000216211 ANKRD35Q8N283 1001 aa17.79■□□□□ 0.44
UPK3A-201ENST00000216211 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
UPK3A-201ENST00000216211 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
UPK3A-201ENST00000216211 STX8Q9UNK0 236 aa17.79■□□□□ 0.44
UPK3A-201ENST00000216211 NMT2O60551 498 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 MCCP23508 829 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 SLC1A4P43007 532 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 STAT2P52630 851 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 OAZ1P54368 228 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 IKQ13123 557 aaPredicted RBP17.78■□□□□ 0.44
UPK3A-201ENST00000216211 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.78■□□□□ 0.44
UPK3A-201ENST00000216211 SH3RF1Q7Z6J0 888 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 CHST13Q8NET6 341 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 GMCL1Q96IK5 515 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 PDLIM7Q9NR12 457 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 IL17RBQ9NRM6 502 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 HOMER2Q9NSB8 354 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 FBXO40Q9UH90 709 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 LCTP09848 1927 aa17.78■□□□□ 0.44
UPK3A-201ENST00000216211 SYNRGQ9UMZ2 1314 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 A0A1W2PQ45 241 aaPredicted RBP17.77■□□□□ 0.44
UPK3A-201ENST00000216211 A0A1W2PQY0 241 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 ADAMTS4O75173 837 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 C1orf53Q5VUE5 145 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 KCTD1Q719H9 257 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 RASGRP2Q7LDG7 609 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 FAM160B2Q86V87 743 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 CHURC1Q8WUH1 139 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 STAG1Q8WVM7 1258 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 FAM227BQ96M60 508 aa17.77■□□□□ 0.44
UPK3A-201ENST00000216211 FGD4Q96M96 766 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms