RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 HAUS4Q9H6D7 363 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 VIMP08670 466 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 RBL2Q08999 1139 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 SPATA1Q5VX52 437 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 PDGFDQ9GZP0 370 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 FEZ2Q9UHY8 353 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 FGAP02671 866 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 NKX1-1Q15270 411 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 PRR5LQ6MZQ0 368 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 SAMD15Q9P1V8 674 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 KIF4AO95239 1232 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 ZAP70P43403 619 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 CHRNDQ07001 517 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 HEATR3Q7Z4Q2 680 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 XAGE2Q96GT9 111 aa12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
DNMT3B-201ENST00000201963 BAG3O95817 575 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 NPR1P16066 1061 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 PAK2Q13177 524 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 POLA2Q14181 598 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 TOGARAM2Q6ZUX3 1019 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 SUPT20HQ8NEM7 779 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 AIFM3Q96NN9 605 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 HAUS7Q99871 368 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 KDRP35968 1356 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 NEBLO76041 1014 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 KRT13P13646 458 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 MFSD14BQ5SR56 506 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 ILDR2Q71H61 639 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 DHX40Q8IX18 779 aaKnown RBP12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 SASH1O94885 1247 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 GYS1P13807 737 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 PLCD1P51178 756 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 FBF1Q8TES7 1133 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 WDR24Q96S15 920 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 IFIH1Q9BYX4 1025 aaKnown RBP12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 FHDC1Q9C0D6 1143 aaPredicted RBP12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
DNMT3B-201ENST00000201963 BUB1BO60566 1050 aaPredicted RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 BCAMP50895 628 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 KIF23Q02241 960 aaPredicted RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 PDE4DQ08499 809 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 CCDC6Q16204 474 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 TTC38Q5R3I4 469 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 ANKRD13CQ8N6S4 541 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 JPH2Q9BR39 696 aaPredicted RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 VPS54Q9P1Q0 977 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 NRXN3Q9Y4C0 1643 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 PLSCR1O15162 318 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 FAM207AQ9NSI2 230 aaPredicted RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 KCNJ18B7U540 433 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 RAPGEF1Q13905 1077 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 KCNJ12Q14500 433 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 TNS2Q63HR2 1409 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 SRLQ86TD4 932 aa12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 CHD2O14647 1828 aaKnown RBP12.83□□□□□ -0.36
DNMT3B-201ENST00000201963 PRDM1O75626 825 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 CTDSPL2Q05D32 466 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 INTS5Q6P9B9 1019 aaKnown RBP12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 TADA2BQ86TJ2 420 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 CCDC25Q86WR0 208 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 TRIML1Q8N9V2 468 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 CALML3P27482 149 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 PDE4BQ07343 736 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 SLC16A10Q8TF71 515 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 NOX5Q96PH1 765 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 NALCNQ8IZF0 1738 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 FRMD3A2A2Y4 597 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 CAMTA2O94983 1202 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 IGKV5-2P06315 115 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 IFT88Q13099 833 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 MMS22LQ6ZRQ5 1243 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 USP42Q9H9J4 1324 aaKnown RBP12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 NCAPD2Q15021 1401 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 CLRN2A0PK11 232 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 MORC3Q14149 939 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 DLGAP5Q15398 846 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 KRT71Q3SY84 523 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 CFAP221Q4G0U5 840 aa12.82□□□□□ -0.36
DNMT3B-201ENST00000201963 NYAP1Q6ZVC0 841 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms