RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Elmsan1E9Q2I4 1089 aaKnown RBP9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 OatP29758 439 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Syt1P46096 421 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Trnp1Q80ZI1 223 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tpcn2Q8BWC0 731 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Oxnad1Q8VE38 311 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 IrgqQ8VIM9 583 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 RragcQ99K70 398 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Cep89Q9CZX2 791 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Gpaa1Q9WTK3 621 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Mansc4Q3UU94 337 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Sh2d1b2Q45HK4 132 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Paxip1Q6NZQ4 1056 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tmc1Q8R4P5 757 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tmod4Q9JLH8 345 aa9.64□□□□□ -0.87
Trim39-205ENSMUST00000173369 Nme9A0A1L1SUL6 329 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Mboat4P0C7A3 435 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Acsl1P41216 699 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Stat1P42225 749 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 PcQ05920 1178 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Traf3ip1Q149C2 625 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Babam1Q3UI43 333 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Nsrp1Q5NCR9 542 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Madcam1Q61826 405 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ifit1Q64282 463 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Adam39Q7M762 756 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ubap2lQ80X50 1107 aaKnown RBP9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Larp6Q8BN59 492 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 PpatQ8CIH9 517 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Rtn1Q8K0T0 780 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Fsip1Q9D3V5 435 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tfcp2Q9ERA0 502 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ngly1Q9JI78 651 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Cacna1fQ9JIS7 1985 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ddit3P35639 168 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Btg1-ps1Q3V0S2 161 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Btg1-ps2Q3V0X0 161 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Hoxa13Q62424 386 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Armc6Q8BNU0 468 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Riox2Q8CD15 465 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Kcnj14Q8JZN3 434 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Fez1Q8K0X8 392 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Paf1Q8K2T8 535 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 BrapQ99MP8 591 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Slc34a2Q9DBP0 697 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Usp14Q9JMA1 493 aaKnown RBP9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tjp3Q9QXY1 905 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 SmapQ9R0P4 181 aaKnown RBP9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Sel1lQ9Z2G6 790 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Myh8P13542 1937 aa9.63□□□□□ -0.87
Trim39-205ENSMUST00000173369 Lamb1P02469 1786 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Fgfr2P21803 821 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 MslnlQ8C160 685 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Rufy2Q8R4C2 606 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Wdr64Q9D565 1086 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Dnah12Q3V0Q1 3086 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Btn2a2A4QPC6 514 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Sptbn5F6UCX4 1208 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Nbr1P97432 988 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 1700010I14RikQ7TPG0 532 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ppp1r10Q80W00 888 aaKnown RBP9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Znf618Q80YY7 953 aaKnown RBP9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Kctd3Q8BFX3 815 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Nr3c2Q8VII8 978 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Rhobtb2Q91V93 728 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ndufb9Q9CQJ8 179 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ccdc47Q9D024 483 aaKnown RBP9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Nudt12Q9DCN1 462 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Gdpd2Q9ESM6 539 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Bub1bQ9Z1S0 1052 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 MthfslL7N466 203 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 AoahO35298 574 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 NfibP97863 570 aaKnown RBP9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Pip5kl1Q6U7H8 395 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 U2af1l4Q8BGJ9 220 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Dnaaf2Q8BPI1 814 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 E4f1Q8CCE9 783 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 KinQ8K339 391 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Arhgef6Q8K4I3 771 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Etnk1Q9D4V0 363 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Hip1rQ9JKY5 1068 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Azi2Q9QYP6 405 aa9.62□□□□□ -0.87
Trim39-205ENSMUST00000173369 Gm42688A0A0R3P9D1 673 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ppp1r9aH3BJD6 1292 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 LdhbP16125 334 aaKnown RBP9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Q3UK37 420 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Jakmip3Q5DTN8 844 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Rgl1Q60695 768 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ccdc142Q8CAI1 738 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Serpinb13Q8CDC0 389 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Cchcr1Q8K2I2 770 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Kiaa1024Q8K3V7 917 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Nol7Q9D7Z3 254 aaKnown RBP9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Ccdc88cQ6VGS5 2009 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 KhsrpQ3U0V1 748 aaKnown RBP9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Erich4Q3UNU4 136 aa9.61□□□□□ -0.87
Trim39-205ENSMUST00000173369 Skint3A7TZF0 458 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Tmigd3G3X8R9 209 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 Prom1O54990 867 aa9.6□□□□□ -0.87
Trim39-205ENSMUST00000173369 FanccP50652 591 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 449.6 ms