RNA–Protein interactions for RNA: ENSMUST00000168203.1

Ebf3-203, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf3, Length 3,724 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-203ENSMUST00000168203 Ccdc152E9PX14 254 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tuft1O08970 390 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Stat5bP42232 786 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Krt86P97861 486 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Foxd1Q61345 456 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Pcdha12Q91Y18 950 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Mis18aQ9CZJ6 204 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Capn12Q9ER56 720 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Pet2A2AHY8 747 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Arhgef2Q60875 985 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 FntaQ61239 377 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Kiaa1328Q6NZK5 612 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Triml1Q8BVP1 470 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Commd10Q8JZY2 202 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Zkscan3Q91VW9 553 aa13.74□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Krt24A1L317 512 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Eef1dP57776 281 aaKnown RBP13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Snai1Q02085 264 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 PcQ05920 1178 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Csrnp2Q8BGQ2 534 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Sde2Q8K1J5 448 aaKnown RBP13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Stag1Q9D3E6 1258 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Suclg2Q9Z2I8 433 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Myh1Q5SX40 1942 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Gm7347D3YYI9 267 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Pth1rP41593 591 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Nlrp4cQ3TKR3 982 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Slc30a9Q5IRJ6 567 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Nab2Q61127 525 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Stk38lQ7TSE6 464 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ube3cQ80U95 1083 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Gucy1a3Q9ERL9 691 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Rtkn2Q14B46 604 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Zfyve27Q3TXX3 415 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Prpf40bQ80W14 870 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Slc39a11Q8BWY7 342 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tmem87aQ8BXN9 555 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 4930519G04RikQ9CPT7 205 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Popdc2Q9ES82 367 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Cxcl11Q9JHH5 100 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Trp53inp1Q9QXE4 239 aa13.73□□□□□ -0.21
Ebf3-203ENSMUST00000168203 CpdO89001 1377 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ssrp1Q08943 708 aaKnown RBP13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tubb2aQ7TMM9 445 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 NelfbQ8C4Y3 580 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tubb2bQ9CWF2 445 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Mipol1Q9D9F8 279 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Pak1O88643 545 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Cep131Q62036 1060 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Stkld1Q80YS9 662 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Vps37dQ810I0 261 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Acbd3Q8BMP6 525 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ccdc122Q8BVN0 290 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Eno4Q8C042 619 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Cnpy3Q9DAU1 276 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Lrp6O88572 1613 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tnrc6cQ3UHC0 1690 aaKnown RBP13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Mapkapk5O54992 473 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Myo1aO88329 1043 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 NeblQ0II04 452 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 F13a1Q8BH61 732 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Caps2Q8BUG5 550 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 4921504E06RikQ8CET2 560 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Emilin2Q8K482 1074 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 HmcesQ8R1M0 353 aaKnown RBP13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Slc14a2Q8R4T9 930 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Rbm5Q91YE7 815 aaKnown RBP13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 NsmfQ99NF2 532 aa13.72□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Arap2Q8BZ05 1703 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Api5O35841 504 aaKnown RBP13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 PparaP23204 468 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Hnrnph2P70333 449 aaKnown RBP13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ccdc157Q5SPX1 718 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Mcm7Q61881 719 aaKnown RBP13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Asic1Q6NXK8 526 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Fhod1Q6P9Q4 1197 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Cep128Q8BI22 1102 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ranbp6Q8BIV3 1105 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Gja10Q9WUS4 505 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Akap2O54931 893 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Epb41l2O70318 988 aaKnown RBP13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Npy5rO70342 466 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Rps8P62242 208 aaKnown RBP13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ell2Q3UKU1 639 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Ckap2Q3V1H1 664 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Tmem232Q5K6N0 675 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Elf1Q60775 612 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Mrps31Q61733 384 aaKnown RBP13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Olfr118Q7TRJ6 321 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Arfgap2Q99K28 520 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 RabggtaQ9JHK4 567 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 PigoQ9JJI6 1093 aa13.71□□□□□ -0.21
Ebf3-203ENSMUST00000168203 Chp1P61022 195 aa13.71□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Traf3ip1Q149C2 625 aa13.71□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ppp1r12cQ3UMT1 782 aa13.71□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Prpf38aQ4FK66 312 aaKnown RBP13.71□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Jade3Q6IE82 823 aa13.71□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Ppp2r5bQ6PD28 497 aa13.71□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Haus7Q8BKT8 364 aa13.71□□□□□ -0.22
Ebf3-203ENSMUST00000168203 Col3a1P08121 1464 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms