RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Jdp2P97875 163 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Eif3j1Q3UGC7 261 aaKnown RBP12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tmem232Q5K6N0 675 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Slc27a1Q60714 646 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Eif3j2Q66JS6 263 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ube3cQ80U95 1083 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tmem143Q8VD26 458 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Syf2Q9D198 242 aaKnown RBP12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ccdc83Q9D4V3 305 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Kif13bA0A286YCV9 1847 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Duox1A2AQ92 1551 aa12.07□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Frmd7A2AD83 703 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 1700029H14RikE9PY36 240 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tbc1d1Q60949 1255 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Sval3Q76I99 144 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cep128Q8BI22 1102 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Fam163bQ8BUM6 167 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Pcdha12Q91Y18 950 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Mfap3Q922T2 349 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Brms1Q99N20 246 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Stag1Q9D3E6 1258 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tpcn1Q9EQJ0 817 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rgs17Q9QZB0 210 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gm28042B7ZCM9 1014 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rexo5D3YW29 759 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Capza3P70190 299 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Top1Q04750 767 aaKnown RBP12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 IntuQ059U7 942 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rnf40Q3U319 1001 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Spout1Q3UHX9 385 aaKnown RBP12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Skap2Q3UND0 358 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Otop3Q80UF9 577 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rasal3Q8C2K5 1041 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Lrp5Q91VN0 1614 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Adamtsl1Q8BLI0 1745 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gm7347D3YYI9 267 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Speer4aF8VPX6 267 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Casp1P29452 402 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gnat2P50149 354 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tcp11Q01755 566 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Zfyve27Q3TXX3 415 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ppp1r7Q3UM45 361 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Pde1cQ64338 706 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Epn1Q80VP1 575 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Olfm5Q8BU90 496 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Terb1Q8C0V1 768 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Snrnp27Q8K194 155 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Q8K2W9 541 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Matr3Q8K310 846 aaKnown RBP12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ubac1Q8VDI7 409 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Saal1Q9D2C2 474 aa12.06□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Scgb2b18A0A087WPA9 112 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ccdc85aQ5SP85 500 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tbc1d5Q80XQ2 815 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cyp4f39Q8BGU0 532 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gga3Q8BMI3 718 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Sash3Q8K352 380 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ttc14Q9CSP9 761 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Celf1P28659 486 aaKnown RBP12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Q3TYL0 343 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Vil1Q62468 827 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Znf131Q8K3J5 619 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Zkscan3Q91VW9 553 aa12.05□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cul4bA2A432 970 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Foxn2E9Q7L6 429 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Nck2O55033 380 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 TbcaP48428 108 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Meis3P97368 378 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Brsk2Q69Z98 735 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rbm26Q6NZN0 1012 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Trim37Q6PCX9 961 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rnf41Q8BH75 317 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ndufb9Q9CQJ8 179 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Dnajc21E9Q8D0 531 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ap1g2O88512 791 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Myl3P09542 204 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tdo2P48776 406 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Usp5P56399 858 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Kifap3P70188 793 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ccdc114Q3UX62 658 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Fchsd1Q6PFY1 688 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 HlfQ8BW74 295 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Sf3b3Q921M3 1217 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Sorbs3Q9R1Z8 733 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Uso1Q9Z1Z0 959 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Myh6Q02566 1938 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 A0A1Y7VML8 143 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rnf187Q8BFX1 236 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Fam193aQ8CGI1 1231 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Ccdc14Q8K2J4 934 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Rbm19Q8R3C6 952 aaKnown RBP12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Tmem39aQ9CYC3 486 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Itga2bQ9QUM0 1033 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Fut8Q9WTS2 575 aa12.04□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gm43738A0A0G2JEA5 862 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cnbd1B1AWM0 430 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Pla2g4aP47713 748 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Gjb4Q02738 266 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Sycp1Q62209 993 aa12.03□□□□□ -0.48
Prpf40b-202ENSMUST00000118287 Cyp24a1Q64441 514 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms