RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Igf2bp2Q5SF07 592 aaKnown RBP9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Nab2Q61127 525 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Eif2b5Q8CHW4 717 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Wasf1Q8R5H6 559 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 MbipQ99LQ1 341 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Isca1Q9D924 129 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ehd4Q9EQP2 541 aa9.8□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Mast3Q3U214 1321 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Itsn1Q9Z0R4 1714 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pde4aO89084 844 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Sox5P35710 763 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Igbp1Q61249 340 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cyp4f39Q8BGU0 532 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Enox1Q8BHR2 643 aaKnown RBP9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Q8BWG4 1187 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Trmt44Q9D2Q2 713 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tulp1Q9Z273 543 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Palm3A2TJV2 734 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pagr1bF6V0H0 108 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Serpinb6dQ3UWK8 375 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Hook2Q7TMK6 716 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Stkld1Q80YS9 662 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kirrel3Q8BR86 778 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pagr1aQ99L02 253 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Appbp2Q9DAX9 585 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Camta1A2A891 1682 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kcnb2A6H8H5 907 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kdm7aQ3UWM4 940 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cep104Q80V31 926 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Eid1Q9DCR4 169 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gucy1a3Q9ERL9 691 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cacna2d3Q9Z1L5 1091 aa9.79□□□□□ -0.84
Col28a1-201ENSMUST00000115537 ChkbO55229 394 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pla2g4bP0C871 782 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Tex11Q14AT2 947 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Scaf8Q6DID3 1268 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ankrd13aQ80UP5 588 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Shtn1Q8K2Q9 631 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Syf2Q9D198 242 aaKnown RBP9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 WtapQ9ER69 396 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gm6588E9Q3K0 461 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Epb41l2O70318 988 aaKnown RBP9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ctnnd1P30999 938 aaKnown RBP9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Igfbp6P47880 238 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kif22Q3V300 660 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ift20Q61025 132 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kif5bQ61768 963 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Iffo1Q8BXL9 562 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Rnf34Q99KR6 376 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Mfap3lQ9D3X9 409 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Nek3Q9R0A5 511 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Cyp2d11P24457 504 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gm5592Q3V0A6 857 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Mum1l1Q4VA55 681 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kctd16Q5DTY9 427 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Fbxw10Q5SUS0 1030 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Asic3Q6X1Y6 530 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Txndc16Q7TN22 820 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Uba5Q8VE47 403 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Ubxn2aQ99KJ0 258 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 NagaQ9QWR8 415 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Lmtk3Q5XJV6 1424 aa9.78□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Kif5cP28738 956 aaKnown RBP9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gnat2P50149 354 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 VrtnQ3SYK4 740 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Prpf40bQ80W14 870 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Gbp9Q8BTS3 619 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 AbraQ8BUZ1 375 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Apol10aQ8CCA5 318 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Dph6Q9CQ28 267 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Fam133bQ9CVI2 245 aaKnown RBP9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Luc7lQ9CYI4 371 aaKnown RBP9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Calr3Q9D9Q6 380 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 MetP16056 1379 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Znf541Q0GGX2 1363 aa9.77□□□□□ -0.84
Col28a1-201ENSMUST00000115537 Pramel3A2AHA7 463 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gm7903A2AWL1 463 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 AV320801A2AWL3 467 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Gm15023L7MUB4 467 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 HalP35492 657 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pdrg1P59048 133 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Myl10Q62082 202 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Ctdspl2Q8BG15 465 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 GopcQ8BH60 463 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Clic6Q8BHB9 596 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Hps6Q8BLY7 805 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Triml1Q8BVP1 470 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Tpcn2Q8BWC0 731 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Fermt3Q8K1B8 665 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 BlmhQ8R016 455 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Mtfr1lQ9CWE0 289 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Pik3ap1Q9EQ32 811 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Crb1Q8VHS2 1405 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Adcy9P51830 1353 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Abcc4E9Q236 1325 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Arhgap6O54834 987 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Zbtb7aO88939 569 aaKnown RBP9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Stim2P83093 746 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Krt86P97861 486 aa9.77□□□□□ -0.85
Col28a1-201ENSMUST00000115537 Snai1Q02085 264 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms