RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Rbm12b2Q66JV4 834 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ddx10Q80Y44 875 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ublcp1Q8BGR9 318 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Gpt2Q8BGT5 522 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Gm13023A2A8N2 498 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 DgkiD3YWQ0 1071 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 GnaqP21279 359 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Pdrg1P59048 133 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 VrtnQ3SYK4 740 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Q3TYL0 343 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Igf2bp2Q5SF07 592 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ttll4Q80UG8 1193 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Sdad1Q80UZ2 687 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Fam161bQ8CB59 589 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ppm1fQ8CGA0 452 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Slc4a8Q8JZR6 1089 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Lrrc41Q8K1C9 807 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Prpf3Q922U1 683 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cdca7Q9D0M2 382 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tacc2Q9JJG0 1149 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Nr2e3Q9QXZ7 395 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Nek3Q9R0A5 511 aa10.86□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Gm28919A0A087WP35 240 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ighmbp2P40694 993 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ankrd13dQ6PD24 605 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Spice1Q8C804 860 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cdan1Q8CC12 1239 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Card14Q99KF0 999 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Luc7lQ9CYI4 371 aaKnown RBP10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ftsj3Q9DBE9 838 aaKnown RBP10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Adarb2Q9JI20 745 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Phlpp1Q8CHE4 1687 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Prr29B1ARI9 187 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Plekhf1Q3TB82 279 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ppp2r5bQ6PD28 497 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Pramel6Q810Y9 485 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Nol7Q9D7Z3 254 aaKnown RBP10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Sall1Q9ER74 1322 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ccdc24E9PUW8 296 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ankrd35E9Q9D8 996 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Stag2O35638 1231 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Trap1aP19473 224 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Pls1Q3V0K9 630 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Commd10Q8JZY2 202 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Trp53inp1Q9QXE4 239 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Col4a1P02463 1669 aa10.85□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ankrd63A2ARS0 390 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Dnm2P39054 870 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cdr2P97817 455 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tmtc2Q56A06 836 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Arid3aQ62431 601 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Rbm26Q6NZN0 1012 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 RalylQ8BTF8 293 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 McamQ8R2Y2 648 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Krt79Q8VED5 531 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Rrp1bQ91YK2 724 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Hps4Q99KG7 671 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Siglec1Q62230 1695 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tpp1O89023 562 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Nf2P46662 596 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Hmgb1P63158 215 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Meis3P97368 378 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tcerg1lQ3B807 590 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tmem232Q5K6N0 675 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Slc9a1Q61165 820 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Ppm1eQ80TL0 749 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Spata4Q8K3V1 295 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Asic2Q925H0 512 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Tsnaxip1Q99P25 704 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 MeiocA2AG06 965 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Copb2O55029 905 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Parp1P11103 1013 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Fkbp1aP26883 108 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 DSCC1Q14AI0 399 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Recql4Q75NR7 1216 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Cacnb1Q8R3Z5 597 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 PpanQ91YU8 470 aaKnown RBP10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Smtnl1Q99LM3 459 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Fbxo3Q9DC63 480 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Plcb1Q9Z1B3 1216 aa10.84□□□□□ -0.67
Pcdh1-201ENSMUST00000057185 Igsf9bE9PZ19 1328 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Cnbd1B1AWM0 430 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Zfand4D3Z3C6 739 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Znf667Q2TL60 609 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ckap2Q3V1H1 664 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Phf20l1Q8CCJ9 1013 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Arhgef6Q8K4I3 771 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Dbndd2Q9CRD4 158 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ppp2r3dQ9Z176 491 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Rnf40Q3U319 1001 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gm5592Q3V0A6 857 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Il17raQ60943 864 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 GypcQ78HU7 95 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 HlfQ8BW74 295 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Apopt1Q9CQW7 192 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Myo1hQ9D6A1 958 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Sh3tc1G3X9F6 1346 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gm43738A0A0G2JEA5 862 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Frmd7A2AD83 703 aa10.83□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gna11P21278 359 aa10.83□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms