RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Jakmip3Q5DTN8 844 aa21.06■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 LRWD1Q8BUI3 648 aaKnown RBP21.06■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 MtrrQ8C1A3 696 aa21.06■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Sde2Q8K1J5 448 aaKnown RBP21.06■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Spata4Q8K3V1 295 aa21.06■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Klhl10Q9D5V2 608 aa21.06■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ano3A2AHL1 981 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 LbrQ3U9G9 626 aaKnown RBP21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Gpbp1Q6NXH3 473 aaKnown RBP21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Txndc16Q7TN22 820 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Epc1Q8C9X6 813 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ccdc14Q8K2J4 934 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Sash3Q8K352 380 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Apopt1Q9CQW7 192 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Dynll2Q9D0M5 89 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Dnajc7Q9QYI3 494 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Lamb1P02469 1786 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 PfasQ5SUR0 1337 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Gas1Q01721 343 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Phc3Q8CHP6 981 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Stap2Q8R0L1 411 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Tmem39aQ9CYC3 486 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 RarsQ9D0I9 660 aaKnown RBP21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Adarb2Q9JI20 745 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Nr2e3Q9QXZ7 395 aa21.05■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Exoc3l2D3YUP5 789 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Eva1cP58659 440 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ctdp1Q7TSG2 960 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Q8C1R3 189 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Zswim4Q8C7B8 1101 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Spice1Q8C804 860 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Prc1Q99K43 603 aaKnown RBP21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Nr1i2O54915 431 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 MpndQ3TV65 487 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Lrrc43Q3V0L5 667 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Fxr1Q61584 677 aaKnown RBP21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Kctd3Q8BFX3 815 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Fbxo18Q8K2I9 1042 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Tmem134Q8R0J4 195 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Alpk1Q9CXB8 1231 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Eif2ak3Q9Z2B5 1114 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Cacna1sQ02789 1880 aa21.04■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Zfp853A0A1D5RM95 733 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Gm13023A2A8N2 498 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Gm5934D3Z4U6 212 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 ByslO54825 436 aaKnown RBP21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 GnaqP21279 359 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Pth1rP41593 591 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Arl6ip4Q9JM93 229 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Pex3Q9QXY9 372 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Zmym2Q9CU65 1376 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Plekhg2Q6KAU7 1340 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Apol7aB2RT54 418 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Slc39a2G3X943 309 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Capn2O08529 700 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Vsnl1P62761 191 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ano9P86044 747 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Armc2Q3URY6 854 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 ItgadQ3V0T4 1168 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ces3aQ63880 571 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Pabpc4Q6PHQ9 660 aaKnown RBP21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Slc14a2Q8R4T9 930 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ces3bQ8VCU1 571 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Psmd10Q9Z2X2 231 aa21.03■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Scgb2b11A0A087WR49 112 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Parp1P11103 1013 aaKnown RBP21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 PpardP35396 440 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Stim1P70302 685 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 PRAG1Q571I4 1179 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 FntaQ61239 377 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 MymkQ9D1N4 221 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Gm28042B7ZCM9 1014 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Gm7347D3YYI9 267 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ddx23D3Z0M9 819 aaKnown RBP21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Gm10378F6XQQ1 160 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Speer4aF8VPX6 267 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Vmn2r71L7N2D8 855 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Mdh1bQ5F204 500 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Ttc26Q8BS45 554 aa21.02■□□□□ 0.96
Shkbp1-201ENSMUST00000003857 Map7d2A2AG50 781 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Psmd14O35593 310 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ccdc57Q6PHN1 1016 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ushbp1Q8R370 680 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Uba5Q8VE47 403 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 CutaQ9CQ89 177 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Psrc1Q9D0P7 329 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 DonsonQ9QXP4 560 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tmem132bF7BAB2 1078 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 SarsP26638 512 aaKnown RBP21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Mindy1Q76LS9 468 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Lrrc1Q80VQ1 524 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Srp68Q8BMA6 625 aaKnown RBP21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Krt222Q8CCX5 294 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Trub2Q91WG3 331 aaKnown RBP21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 RabggtaQ9JHK4 567 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ercc4Q9QZD4 917 aa21.01■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Nfil3O08750 462 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Kcna1P16388 495 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Atp8b1Q148W0 1251 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Rpusd2Q149F1 553 aa21■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms