RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Eif2ak3Q9Z2B5 1114 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Pik3c2aQ61194 1686 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ano3A2AHL1 981 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Parp1P11103 1013 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Sap30bpQ02614 308 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Dcaf17Q3TUL7 519 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Mrps31Q61733 384 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Rbm26Q6NZN0 1012 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Aggf1Q7TN31 711 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Lrsam1Q80ZI6 727 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Maip1Q8BHE8 291 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 SltmQ8CH25 1031 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ulbp1Q8HWA3 334 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Kiaa1024Q8K3V7 917 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Copb2O55029 905 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Gfpt1P47856 697 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Krt86P97861 486 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Rapgef1Q3UHC1 1224 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Hdac4Q6NZM9 1076 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ankrd23Q812A3 306 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Als2cr12Q8BVM7 383 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 CutaQ9CQ89 177 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Lman1Q9D0F3 517 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Nek3Q9R0A5 511 aa10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Prpf40aQ9R1C7 953 aaKnown RBP10.54□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Naaladl2A0A0N4SUJ3 795 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Cnbd1B1AWM0 430 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Mx1P09922 631 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Herc4Q6PAV2 1057 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 GypcQ78HU7 95 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Klhl7Q8BUL5 586 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Gpcpd1Q8C0L9 675 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Apopt1Q9CQW7 192 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ccdc89Q9DA73 370 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Capn12Q9ER56 720 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Med1Q925J9 1575 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Prr29B1ARI9 187 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Nr1i2O54915 431 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 H2afxP27661 143 aaKnown RBP10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Skap2Q3UND0 358 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ckap2Q3V1H1 664 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Fkbp3Q62446 224 aaKnown RBP10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Asnsd1Q8BFS9 627 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Erlin2Q8BFZ9 340 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Sf3a3Q9D554 501 aaKnown RBP10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ahnak2E9PYB0 1738 aaKnown RBP10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Qtrt2B8ZXI1 415 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Stag2O35638 1231 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Srp68Q8BMA6 625 aaKnown RBP10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Dnajc14Q921R4 703 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 HibadhQ99L13 335 aaKnown RBP10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Mipol1Q9D9F8 279 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 EcsitQ9QZH6 435 aa10.53□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Gm28510A0A087WP28 240 aa10.52□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Serpinc1P32261 465 aa10.52□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Pth1rP41593 591 aa10.52□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Vsnl1P62761 191 aa10.52□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Slc39a11Q8BWY7 342 aa10.52□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Rrp1bQ91YK2 724 aaKnown RBP10.52□□□□□ -0.72
Col6a1-201ENSMUST00000001147 Ptpn23Q6PB44 1692 aa10.52□□□□□ -0.72
Col6a1-201ENSMUST00000001147 MeiocA2AG06 965 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Nfatc2ipO09130 412 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Nf2P46662 596 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ccdc114Q3UX62 658 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Rexo1Q7TT28 1213 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 D130040H23RikQ8BII3 405 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Traf3ip3Q8C0G2 513 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Cacnb1Q8R3Z5 597 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 MycbpQ9EQS3 103 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Adarb2Q9JI20 745 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Pcdh10E9PXQ7 1057 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tpp1O89023 562 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gna15P30678 374 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Krt40Q6IFX3 439 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Znf428Q8C1M2 176 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Spice1Q8C804 860 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Asic2Q925H0 512 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Kif17Q99PW8 1038 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Dbndd2Q9CRD4 158 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Myo1hQ9D6A1 958 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Psma7Q9Z2U0 248 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Acot10Q32MW3 439 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Trappc10Q3TLI0 1259 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Rnf40Q3U319 1001 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Pm20d1Q8C165 503 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Galnt15Q9D2N8 638 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Dpf1Q9QX66 387 aa10.52□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Sh3tc1G3X9F6 1346 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Il15P48346 162 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Gm5592Q3V0A6 857 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ccpg1Q640L3 753 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Armcx3Q8BHS6 379 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ushbp1Q8R370 680 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Tktl2Q9D4D4 627 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Trp53inp1Q9QXE4 239 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 AW822073A0A0N4SUK1 652 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Ccdc24E9PUW8 296 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Zfp213E9QAW0 468 aa10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 LdhaP06151 332 aaKnown RBP10.51□□□□□ -0.73
Col6a1-201ENSMUST00000001147 Mcm5P49718 733 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 89.9 ms