RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR39B	snR39B	PHO90	P39535	881 aa		0.73	□□□□□ -2.29
snR39B	snR39B	GPP2	P40106	250 aa	Known RBP	0.73	□□□□□ -2.29
snR39B	snR39B	TAM41	P53230	385 aa		0.73	□□□□□ -2.29
snR39B	snR39B	SHY1	P53266	389 aa		0.73	□□□□□ -2.29
snR39B	snR39B	ESF2	P53743	316 aa	Known RBP	0.73	□□□□□ -2.29
snR39B	snR39B	YPL108W	Q02872	168 aa	Predicted RBP	0.73	□□□□□ -2.29
snR39B	snR39B	MSS11	Q03825	758 aa		0.73	□□□□□ -2.29
snR39B	snR39B	RRN11	Q04712	507 aa		0.73	□□□□□ -2.29
snR39B	snR39B	ATG23	Q06671	453 aa		0.73	□□□□□ -2.29
snR39B	snR39B	AIM6	Q07716	390 aa		0.73	□□□□□ -2.29
snR39B	snR39B	YOR387C	Q08910	206 aa		0.73	□□□□□ -2.29
snR39B	snR39B	DBP10	Q12389	995 aa	Known RBP	0.73	□□□□□ -2.29
snR39B	snR39B	ATR1	P13090	542 aa		0.72	□□□□□ -2.29
snR39B	snR39B	CMK1	P27466	446 aa	Known RBP	0.72	□□□□□ -2.29
snR39B	snR39B	GAC1	P28006	793 aa		0.72	□□□□□ -2.29
snR39B	snR39B	ACH1	P32316	526 aa		0.72	□□□□□ -2.29
snR39B	snR39B	TUL1	P36096	758 aa		0.72	□□□□□ -2.29
snR39B	snR39B	YLF2	P38746	405 aa		0.72	□□□□□ -2.29
snR39B	snR39B	NDT80	P38830	627 aa		0.72	□□□□□ -2.29
snR39B	snR39B	BUD16	P39988	312 aa		0.72	□□□□□ -2.29
snR39B	snR39B	MRX1	P40050	688 aa		0.72	□□□□□ -2.29
snR39B	snR39B	PMT3	P47190	753 aa		0.72	□□□□□ -2.29
snR39B	snR39B	MSO1	P53604	210 aa	Known RBP	0.72	□□□□□ -2.29
snR39B	snR39B	ARK1	P53974	638 aa		0.72	□□□□□ -2.29
snR39B	snR39B	ADE16	P54113	591 aa	Known RBP	0.72	□□□□□ -2.29
snR39B	snR39B	NUP100	Q02629	959 aa		0.72	□□□□□ -2.29
snR39B	snR39B	CIA1	Q05583	330 aa		0.72	□□□□□ -2.29
snR39B	snR39B	PSF3	Q12146	194 aa		0.72	□□□□□ -2.29
snR39B	snR39B	AYT1	Q12226	474 aa		0.72	□□□□□ -2.29
snR39B	snR39B	HRT3	Q12347	344 aa		0.72	□□□□□ -2.29
snR39B	snR39B	RMP1	Q12530	201 aa		0.72	□□□□□ -2.29
snR39B	snR39B	ADR1	P07248	1323 aa		0.71	□□□□□ -2.3
snR39B	snR39B	TYR1	P20049	452 aa		0.71	□□□□□ -2.3
snR39B	snR39B	NAM9	P27929	486 aa		0.71	□□□□□ -2.3
snR39B	snR39B	YIM1	P28625	365 aa		0.71	□□□□□ -2.3
snR39B	snR39B	MCM4	P30665	933 aa	Known RBP	0.71	□□□□□ -2.3
snR39B	snR39B	VPS17	P32913	551 aa		0.71	□□□□□ -2.3
snR39B	snR39B	LHS1	P36016	881 aa		0.71	□□□□□ -2.3
snR39B	snR39B	ADE17	P38009	592 aa	Known RBP	0.71	□□□□□ -2.3
snR39B	snR39B	NPR2	P39923	615 aa		0.71	□□□□□ -2.3
snR39B	snR39B	TIF4631	P39935	952 aa	Known RBP	0.71	□□□□□ -2.3
snR39B	snR39B	UME1	Q03010	460 aa		0.71	□□□□□ -2.3
snR39B	snR39B	VAM6	Q07468	1049 aa		0.71	□□□□□ -2.3
snR39B	snR39B	FMP45	Q07651	309 aa		0.71	□□□□□ -2.3
snR39B	snR39B	SEC62	P21825	274 aa		0.7	□□□□□ -2.3
snR39B	snR39B	RVS161	P25343	265 aa	Known RBP	0.7	□□□□□ -2.3
snR39B	snR39B	RER1	P25560	188 aa		0.7	□□□□□ -2.3
snR39B	snR39B	UBP13	P38187	747 aa		0.7	□□□□□ -2.3
snR39B	snR39B	MTC4	P38335	694 aa	Known RBP	0.7	□□□□□ -2.3
snR39B	snR39B	ARP1	P38696	384 aa		0.7	□□□□□ -2.3
snR39B	snR39B	AXL1	P40851	1208 aa		0.7	□□□□□ -2.3
snR39B	snR39B	DUG1	P43616	481 aa	Known RBP	0.7	□□□□□ -2.3
snR39B	snR39B	SPC105	P53148	917 aa		0.7	□□□□□ -2.3
snR39B	snR39B	RBA50	Q04418	439 aa		0.7	□□□□□ -2.3
snR39B	snR39B	ECM38	Q05902	660 aa	Predicted RBP	0.7	□□□□□ -2.3
snR39B	snR39B	ENT4	Q07872	247 aa		0.7	□□□□□ -2.3
snR39B	snR39B	ICL2	Q12031	575 aa		0.7	□□□□□ -2.3
snR39B	snR39B	YRM1	Q12340	786 aa		0.7	□□□□□ -2.3
snR39B	snR39B	YER078W-A	Q3E7A2	54 aa		0.7	□□□□□ -2.3
snR39B	snR39B	HEM2	P05373	342 aa		0.69	□□□□□ -2.3
snR39B	snR39B	PET111	P08468	800 aa		0.69	□□□□□ -2.3
snR39B	snR39B	SRP54	P20424	541 aa	Known RBP	0.69	□□□□□ -2.3
snR39B	snR39B	URK1	P27515	501 aa		0.69	□□□□□ -2.3
snR39B	snR39B	FUN19	P28003	413 aa	Predicted RBP	0.69	□□□□□ -2.3
snR39B	snR39B	SOF1	P33750	489 aa	Known RBP	0.69	□□□□□ -2.3
snR39B	snR39B	SIP2	P34164	415 aa	Known RBP	0.69	□□□□□ -2.3
snR39B	snR39B	SWD3	P38123	315 aa		0.69	□□□□□ -2.3
snR39B	snR39B	BMT2	P38278	337 aa		0.69	□□□□□ -2.3
snR39B	snR39B	IMA5	P40884	581 aa		0.69	□□□□□ -2.3
snR39B	snR39B	CTK2	P46962	323 aa		0.69	□□□□□ -2.3
snR39B	snR39B	NIT2	P47016	307 aa		0.69	□□□□□ -2.3
snR39B	snR39B	PUS4	P48567	403 aa	Known RBP	0.69	□□□□□ -2.3
snR39B	snR39B	SLD3	P53135	668 aa		0.69	□□□□□ -2.3
snR39B	snR39B	PKP2	P53170	491 aa		0.69	□□□□□ -2.3
snR39B	snR39B	YTP1	P53584	459 aa		0.69	□□□□□ -2.3
snR39B	snR39B	HAL1	Q01766	294 aa		0.69	□□□□□ -2.3
snR39B	snR39B	UTP14	Q04500	899 aa	Known RBP	0.69	□□□□□ -2.3
snR39B	snR39B	YPS3	Q12303	508 aa		0.69	□□□□□ -2.3
snR39B	snR39B	VAS1	P07806	1104 aa	Known RBP	0.68	□□□□□ -2.3
snR39B	snR39B	PRB1	P09232	635 aa		0.68	□□□□□ -2.3
snR39B	snR39B	LPD1	P09624	499 aa	Known RBP	0.68	□□□□□ -2.3
snR39B	snR39B	YML003W	P0CF16	290 aa		0.68	□□□□□ -2.3
snR39B	snR39B	BIK1	P11709	440 aa		0.68	□□□□□ -2.3
snR39B	snR39B	RFA2	P26754	273 aa	Known RBP	0.68	□□□□□ -2.3
snR39B	snR39B	SNC1	P31109	117 aa		0.68	□□□□□ -2.3
snR39B	snR39B	HEM12	P32347	362 aa	Predicted RBP	0.68	□□□□□ -2.3
snR39B	snR39B	CBF2	P32504	956 aa		0.68	□□□□□ -2.3
snR39B	snR39B	MIA40	P36046	403 aa		0.68	□□□□□ -2.3
snR39B	snR39B	SDS22	P36047	338 aa		0.68	□□□□□ -2.3
snR39B	snR39B	PMU1	P36069	295 aa		0.68	□□□□□ -2.3
snR39B	snR39B	UTH1	P36135	365 aa		0.68	□□□□□ -2.3
snR39B	snR39B	GEX2	P36173	615 aa		0.68	□□□□□ -2.3
snR39B	snR39B	YIL060W	P40519	144 aa		0.68	□□□□□ -2.3
snR39B	snR39B	RPN11	P43588	306 aa	Known RBP	0.68	□□□□□ -2.3
snR39B	snR39B	SOL4	P53315	255 aa		0.68	□□□□□ -2.3
snR39B	snR39B	YNR029C	P53729	429 aa	Known RBP	0.68	□□□□□ -2.3
snR39B	snR39B	SAM50	P53969	484 aa		0.68	□□□□□ -2.3
snR39B	snR39B	ELP3	Q02908	557 aa	Known RBP	0.68	□□□□□ -2.3
snR39B	snR39B	MTG1	Q03151	367 aa	Predicted RBP	0.68	□□□□□ -2.3
snR39B	snR39B	PBA1	Q05778	276 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms