RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W YDR262WQ12331 272 aa10.19□□□□□ -0.78
MSF1YPR047W VPS34P22543 875 aa10.18□□□□□ -0.78
MSF1YPR047W YCL068CP25593 260 aa10.18□□□□□ -0.78
MSF1YPR047W SPT16P32558 1035 aaKnown RBP10.18□□□□□ -0.78
MSF1YPR047W MFT1P33441 392 aaKnown RBP10.18□□□□□ -0.78
MSF1YPR047W MRPL37P36532 105 aa10.18□□□□□ -0.78
MSF1YPR047W PBP2P38151 413 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
MSF1YPR047W ACO2P39533 789 aa10.18□□□□□ -0.78
MSF1YPR047W CFD1P40558 293 aa10.18□□□□□ -0.78
MSF1YPR047W RTA1P53047 317 aa10.18□□□□□ -0.78
MSF1YPR047W ZRG17P53735 605 aa10.18□□□□□ -0.78
MSF1YPR047W OSH6Q02201 448 aa10.18□□□□□ -0.78
MSF1YPR047W ECI1Q05871 280 aa10.18□□□□□ -0.78
MSF1YPR047W SLD7Q08457 257 aa10.18□□□□□ -0.78
MSF1YPR047W PFA4Q12006 378 aa10.18□□□□□ -0.78
MSF1YPR047W GTT2Q12390 233 aa10.18□□□□□ -0.78
MSF1YPR047W SEC39Q12745 709 aa10.18□□□□□ -0.78
MSF1YPR047W AMD1P15274 810 aaKnown RBP10.17□□□□□ -0.78
MSF1YPR047W VHC1P38329 1120 aa10.17□□□□□ -0.78
MSF1YPR047W CSL4P53859 292 aaPredicted RBP10.17□□□□□ -0.78
MSF1YPR047W SML1Q04964 104 aa10.17□□□□□ -0.78
MSF1YPR047W SPS1P08458 490 aa10.16□□□□□ -0.78
MSF1YPR047W ERG20P08524 352 aaKnown RBP10.16□□□□□ -0.78
MSF1YPR047W INO1P11986 533 aa10.16□□□□□ -0.78
MSF1YPR047W MGT1P26188 188 aa10.16□□□□□ -0.78
MSF1YPR047W BEM1P29366 551 aa10.16□□□□□ -0.78
MSF1YPR047W PAP1P29468 568 aaKnown RBP10.16□□□□□ -0.78
MSF1YPR047W CDC13P32797 924 aaKnown RBP10.16□□□□□ -0.78
MSF1YPR047W YSW1P38280 609 aa10.16□□□□□ -0.78
MSF1YPR047W ALR2P43553 858 aa10.16□□□□□ -0.78
MSF1YPR047W PEX8P53248 589 aa10.16□□□□□ -0.78
MSF1YPR047W NHX1Q04121 633 aa10.16□□□□□ -0.78
MSF1YPR047W BSC6Q08280 497 aa10.16□□□□□ -0.78
MSF1YPR047W RMD5Q12508 421 aa10.16□□□□□ -0.78
MSF1YPR047W HSP60P19882 572 aaKnown RBP10.16□□□□□ -0.78
MSF1YPR047W GUT2P32191 649 aa10.16□□□□□ -0.78
MSF1YPR047W MEF2P39677 819 aa10.16□□□□□ -0.78
MSF1YPR047W NNF1P47149 201 aa10.16□□□□□ -0.78
MSF1YPR047W HST3P53687 447 aa10.16□□□□□ -0.78
MSF1YPR047W ARP4P80428 489 aa10.16□□□□□ -0.78
MSF1YPR047W YDR109CQ04585 715 aa10.16□□□□□ -0.78
MSF1YPR047W DIC1Q06143 298 aa10.16□□□□□ -0.78
MSF1YPR047W YOR012WQ12351 137 aa10.16□□□□□ -0.78
MSF1YPR047W PET123P17558 318 aa10.15□□□□□ -0.79
MSF1YPR047W YFL012WP43580 148 aa10.15□□□□□ -0.79
MSF1YPR047W ARH1P48360 493 aa10.15□□□□□ -0.79
MSF1YPR047W RTS3P53289 263 aa10.15□□□□□ -0.79
MSF1YPR047W RHO3Q00245 231 aaKnown RBP10.15□□□□□ -0.79
MSF1YPR047W ECM9Q02202 377 aa10.15□□□□□ -0.79
MSF1YPR047W UTP6Q02354 440 aaKnown RBP10.15□□□□□ -0.79
MSF1YPR047W TFB2Q02939 513 aa10.15□□□□□ -0.79
MSF1YPR047W YOR389WQ08912 624 aa10.15□□□□□ -0.79
MSF1YPR047W YPL278CQ08990 100 aa10.15□□□□□ -0.79
MSF1YPR047W MDM35O60200 86 aa10.14□□□□□ -0.79
MSF1YPR047W YML002WP0CF17 737 aa10.14□□□□□ -0.79
MSF1YPR047W NSP1P14907 823 aaKnown RBP10.14□□□□□ -0.79
MSF1YPR047W YCR099CP25657 155 aa10.14□□□□□ -0.79
MSF1YPR047W PET309P32522 965 aaPredicted RBP10.14□□□□□ -0.79
MSF1YPR047W DOM34P33309 386 aa10.14□□□□□ -0.79
MSF1YPR047W RPF2P36160 344 aaKnown RBP10.14□□□□□ -0.79
MSF1YPR047W SSN3P39073 555 aa10.14□□□□□ -0.79
MSF1YPR047W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
MSF1YPR047W ROT1Q03691 256 aa10.14□□□□□ -0.79
MSF1YPR047W URH1Q04179 340 aa10.14□□□□□ -0.79
MSF1YPR047W GRS2Q06817 618 aa10.14□□□□□ -0.79
MSF1YPR047W YOL073CQ08232 322 aa10.14□□□□□ -0.79
MSF1YPR047W RSC6P25632 483 aa10.13□□□□□ -0.79
MSF1YPR047W CDC20P26309 610 aa10.13□□□□□ -0.79
MSF1YPR047W URA10P30402 227 aa10.13□□□□□ -0.79
MSF1YPR047W NRP1P32770 719 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
MSF1YPR047W TOM20P35180 183 aa10.13□□□□□ -0.79
MSF1YPR047W EMC3P36039 253 aa10.13□□□□□ -0.79
MSF1YPR047W NTR2P36118 322 aaPredicted RBP10.13□□□□□ -0.79
MSF1YPR047W LYS1P38998 373 aaRIP-Chip data10.13□□□□□ -0.79not detected
MSF1YPR047W GIM4P40005 111 aaKnown RBP10.13□□□□□ -0.79
MSF1YPR047W LRO1P40345 661 aa10.13□□□□□ -0.79
MSF1YPR047W ALK1P43633 760 aaKnown RBP10.13□□□□□ -0.79
MSF1YPR047W ARE2P53629 642 aaKnown RBP10.13□□□□□ -0.79
MSF1YPR047W ERF2Q06551 359 aa10.13□□□□□ -0.79
MSF1YPR047W RRP12Q12754 1228 aaKnown RBP10.13□□□□□ -0.79
MSF1YPR047W PDC5P16467 563 aaKnown RBP10.12□□□□□ -0.79
MSF1YPR047W SKN1P33336 771 aa10.12□□□□□ -0.79
MSF1YPR047W TRM7P38238 310 aaKnown RBP10.12□□□□□ -0.79
MSF1YPR047W YHR033WP38690 423 aa10.12□□□□□ -0.79
MSF1YPR047W YHR182WP38870 785 aa10.12□□□□□ -0.79
MSF1YPR047W RSC3Q06639 885 aa10.12□□□□□ -0.79
MSF1YPR047W ACM1Q08981 209 aa10.12□□□□□ -0.79
MSF1YPR047W SWI5P08153 709 aa10.11□□□□□ -0.79
MSF1YPR047W ATP12P22135 325 aa10.11□□□□□ -0.79
MSF1YPR047W MF(ALPHA)2P32435 120 aa10.11□□□□□ -0.79
MSF1YPR047W HOG1P32485 435 aa10.11□□□□□ -0.79
MSF1YPR047W MAD1P40957 749 aa10.11□□□□□ -0.79
MSF1YPR047W NMD5P46970 1048 aa10.11□□□□□ -0.79
MSF1YPR047W RPL22BP56628 122 aaKnown RBP10.11□□□□□ -0.79
MSF1YPR047W SIZ1Q04195 904 aa10.11□□□□□ -0.79
MSF1YPR047W GPR1Q12361 961 aa10.11□□□□□ -0.79
MSF1YPR047W HSH49Q99181 213 aaPredicted RBP10.11□□□□□ -0.79
MSF1YPR047W GCR1P07261 785 aa10.1□□□□□ -0.79
MSF1YPR047W FUM1P08417 488 aaKnown RBP10.1□□□□□ -0.79
MSF1YPR047W URA7P28274 579 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms