RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W ACA1P39970 489 aa1.97□□□□□ -2.09
YOP1YPR028W YIR014WP40570 242 aa1.97□□□□□ -2.09
YOP1YPR028W IAH1P41734 238 aa1.97□□□□□ -2.09
YOP1YPR028W ERR3P42222 437 aa1.97□□□□□ -2.09
YOP1YPR028W TRS130Q03660 1102 aa1.97□□□□□ -2.09
YOP1YPR028W YLR455WQ06188 304 aa1.97□□□□□ -2.09
YOP1YPR028W APA1P16550 321 aaKnown RBP1.96□□□□□ -2.1
YOP1YPR028W MSM1P22438 575 aa1.96□□□□□ -2.1
YOP1YPR028W STE50P25344 346 aa1.96□□□□□ -2.1
YOP1YPR028W PWP2P25635 923 aaKnown RBP1.96□□□□□ -2.1
YOP1YPR028W VPS24P36095 224 aaKnown RBP1.96□□□□□ -2.1
YOP1YPR028W MRPL36P36531 177 aa1.96□□□□□ -2.1
YOP1YPR028W ADE17P38009 592 aaKnown RBP1.96□□□□□ -2.1
YOP1YPR028W ARC35P53731 342 aaKnown RBP1.96□□□□□ -2.1
YOP1YPR028W ASI1P54074 624 aa1.96□□□□□ -2.1
YOP1YPR028W BLS1Q06071 122 aa1.96□□□□□ -2.1
YOP1YPR028W SWA2Q06677 668 aa1.96□□□□□ -2.1
YOP1YPR028W SWT1Q12104 458 aa1.96□□□□□ -2.1
YOP1YPR028W ATP2P00830 511 aaKnown RBP1.95□□□□□ -2.1
YOP1YPR028W PET111P08468 800 aa1.95□□□□□ -2.1
YOP1YPR028W YCL049CP25577 312 aa1.95□□□□□ -2.1
YOP1YPR028W DPB3P27344 201 aa1.95□□□□□ -2.1
YOP1YPR028W MRS6P32864 603 aaKnown RBP1.95□□□□□ -2.1
YOP1YPR028W NPR3P38742 1146 aa1.95□□□□□ -2.1
YOP1YPR028W MDM31P38880 579 aa1.95□□□□□ -2.1
YOP1YPR028W PSF2P40359 213 aa1.95□□□□□ -2.1
YOP1YPR028W DCP2P53550 970 aaKnown RBP1.95□□□□□ -2.1
YOP1YPR028W CSL4P53859 292 aaPredicted RBP1.95□□□□□ -2.1
YOP1YPR028W CTL1Q03220 320 aaKnown RBP1.95□□□□□ -2.1
YOP1YPR028W ATG16Q03818 150 aa1.95□□□□□ -2.1
YOP1YPR028W PCD1Q12524 340 aa1.95□□□□□ -2.1
YOP1YPR028W NUC1P08466 329 aa1.94□□□□□ -2.1
YOP1YPR028W GLN3P18494 730 aa1.94□□□□□ -2.1
YOP1YPR028W DBF20P32328 564 aa1.94□□□□□ -2.1
YOP1YPR028W NUP120P35729 1037 aa1.94□□□□□ -2.1
YOP1YPR028W STV1P37296 890 aa1.94□□□□□ -2.1
YOP1YPR028W IES5P40060 125 aa1.94□□□□□ -2.1
YOP1YPR028W YIL161WP40449 235 aaKnown RBP1.94□□□□□ -2.1
YOP1YPR028W SAP185P40856 1058 aa1.94□□□□□ -2.1
YOP1YPR028W SMK1P41808 388 aa1.94□□□□□ -2.1
YOP1YPR028W SPG5P42933 373 aa1.94□□□□□ -2.1
YOP1YPR028W SWP82P43554 623 aa1.94□□□□□ -2.1
YOP1YPR028W SGF73P53165 657 aa1.94□□□□□ -2.1
YOP1YPR028W YGR021WP53212 290 aa1.94□□□□□ -2.1
YOP1YPR028W MAK10Q02197 733 aa1.94□□□□□ -2.1
YOP1YPR028W MRPL13Q02204 264 aa1.94□□□□□ -2.1
YOP1YPR028W EKI1Q03764 534 aa1.94□□□□□ -2.1
YOP1YPR028W ARP10Q04549 284 aa1.94□□□□□ -2.1
YOP1YPR028W TFC6Q06339 672 aa1.94□□□□□ -2.1
YOP1YPR028W COX17Q12287 69 aa1.94□□□□□ -2.1
YOP1YPR028W TY2A-LR1P0C2J4 438 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-FP0CX61 438 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-GR2P0CX62 438 aa1.93□□□□□ -2.1
YOP1YPR028W MTF2P10849 440 aa1.93□□□□□ -2.1
YOP1YPR028W SPO16P17122 198 aa1.93□□□□□ -2.1
YOP1YPR028W TKL1P23254 680 aaKnown RBP1.93□□□□□ -2.1
YOP1YPR028W TY2A-CP25383 438 aa1.93□□□□□ -2.1
YOP1YPR028W RAD16P31244 790 aa1.93□□□□□ -2.1
YOP1YPR028W XRS2P33301 854 aa1.93□□□□□ -2.1
YOP1YPR028W NTR2P36118 322 aaPredicted RBP1.93□□□□□ -2.1
YOP1YPR028W AAP1P37898 856 aaKnown RBP1.93□□□□□ -2.1
YOP1YPR028W FUI1P38196 639 aa1.93□□□□□ -2.1
YOP1YPR028W IFA38P38286 347 aa1.93□□□□□ -2.1
YOP1YPR028W RTS1P38903 757 aa1.93□□□□□ -2.1
YOP1YPR028W YJL068CP40363 299 aa1.93□□□□□ -2.1
YOP1YPR028W HXT9P40885 567 aa1.93□□□□□ -2.1
YOP1YPR028W RTS2P40962 232 aa1.93□□□□□ -2.1
YOP1YPR028W CTK2P46962 323 aa1.93□□□□□ -2.1
YOP1YPR028W YNR061CP53747 219 aa1.93□□□□□ -2.1
YOP1YPR028W YMR178WQ03219 274 aaKnown RBP1.93□□□□□ -2.1
YOP1YPR028W PFA5Q03289 374 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-DR2Q03483 438 aa1.93□□□□□ -2.1
YOP1YPR028W CRN1Q06440 651 aa1.93□□□□□ -2.1
YOP1YPR028W TMA16Q08687 178 aa1.93□□□□□ -2.1
YOP1YPR028W YLL056CQ12177 298 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-BQ12260 438 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-OR2Q12293 438 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-DR1Q12392 438 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-OR1Q12439 438 aa1.93□□□□□ -2.1
YOP1YPR028W TY2A-DR3Q99303 438 aa1.93□□□□□ -2.1
YOP1YPR028W SSM4P40318 1319 aa1.92□□□□□ -2.1
YOP1YPR028W PFK2P16862 959 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
YOP1YPR028W UBC1P21734 215 aaKnown RBP1.92□□□□□ -2.1
YOP1YPR028W PSY4P38193 441 aa1.92□□□□□ -2.1
YOP1YPR028W SEC31P38968 1273 aaKnown RBP1.92□□□□□ -2.1
YOP1YPR028W PSD1P39006 500 aa1.92□□□□□ -2.1
YOP1YPR028W ECM10P39987 644 aa1.92□□□□□ -2.1
YOP1YPR028W YPI1P43587 155 aa1.92□□□□□ -2.1
YOP1YPR028W RPN11P43588 306 aaKnown RBP1.92□□□□□ -2.1
YOP1YPR028W ASE1P50275 885 aa1.92□□□□□ -2.1
YOP1YPR028W COG1P53079 417 aa1.92□□□□□ -2.1
YOP1YPR028W RRT6P53117 311 aaPredicted RBP1.92□□□□□ -2.1
YOP1YPR028W YTP1P53584 459 aa1.92□□□□□ -2.1
YOP1YPR028W BOR1P53838 576 aa1.92□□□□□ -2.1
YOP1YPR028W RSM28Q03430 361 aa1.92□□□□□ -2.1
YOP1YPR028W CSR1Q06705 408 aaKnown RBP1.92□□□□□ -2.1
YOP1YPR028W EDE1P34216 1381 aa1.92□□□□□ -2.1
YOP1YPR028W TPK1P06244 397 aa1.91□□□□□ -2.1
YOP1YPR028W TRX2P22803 104 aaKnown RBP1.91□□□□□ -2.1
YOP1YPR028W CLB2P24869 491 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms