RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCL1	YPR025C	DPB11	P47027	764 aa	Predicted RBP	4.08	□□□□□ -1.76
CCL1	YPR025C	NNF2	P53253	936 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	RPL15B	P54780	204 aa	Predicted RBP	4.08	□□□□□ -1.76
CCL1	YPR025C	MRPL1	Q04599	285 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	GEP3	Q08622	556 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	ATX2	Q12067	313 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	YLR112W	Q12130	139 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	NKP1	Q12493	238 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	ENT1	Q12518	454 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	YOR111W	Q99210	232 aa		4.08	□□□□□ -1.76
CCL1	YPR025C	STE50	P25344	346 aa		4.07	□□□□□ -1.76
CCL1	YPR025C	MGM1	P32266	881 aa		4.07	□□□□□ -1.76
CCL1	YPR025C	SAC1	P32368	623 aa	Known RBP	4.07	□□□□□ -1.76
CCL1	YPR025C	TOM71	P38825	639 aa	Known RBP	4.07	□□□□□ -1.76
CCL1	YPR025C	RTS1	P38903	757 aa		4.07	□□□□□ -1.76
CCL1	YPR025C	ASI1	P54074	624 aa		4.07	□□□□□ -1.76
CCL1	YPR025C	VTC3	Q02725	835 aa		4.07	□□□□□ -1.76
CCL1	YPR025C	RIX7	Q07844	837 aa	Known RBP	4.07	□□□□□ -1.76
CCL1	YPR025C	RGT2	Q12300	763 aa		4.07	□□□□□ -1.76
CCL1	YPR025C	CDC16	P09798	840 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	AIM17	P23180	465 aa	Known RBP	4.06	□□□□□ -1.76
CCL1	YPR025C	MAL33	P38157	468 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	TMA108	P40462	946 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	PCI8	P40512	444 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	YIR016W	P40572	265 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	YTP1	P53584	459 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	YSA1	Q01976	231 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	INA17	Q02888	182 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	POS5	Q06892	414 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	PSR1	Q07800	427 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	GSH2	Q08220	491 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	YOL159C	Q08300	171 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	TCO89	Q08921	799 aa		4.06	□□□□□ -1.76
CCL1	YPR025C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
CCL1	YPR025C	SPC97	P38863	823 aa		4.05	□□□□□ -1.76
CCL1	YPR025C	VRG4	P40107	337 aa		4.05	□□□□□ -1.76
CCL1	YPR025C	PKP1	P40530	394 aa		4.05	□□□□□ -1.76
CCL1	YPR025C	LYS4	P49367	693 aa	Predicted RBP	4.05	□□□□□ -1.76
CCL1	YPR025C	SCW4	P53334	386 aa	Known RBP	4.05	□□□□□ -1.76
CCL1	YPR025C	SUB1	P54000	292 aa	Known RBP	4.05	□□□□□ -1.76
CCL1	YPR025C	ATG9	Q12142	997 aa		4.05	□□□□□ -1.76
CCL1	YPR025C	INP53	Q12271	1107 aa		4.05	□□□□□ -1.76
CCL1	YPR025C	SPE2	P21182	396 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	PWP1	P21304	576 aa	Known RBP	4.04	□□□□□ -1.76
CCL1	YPR025C	SAN1	P22470	610 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	YCK1	P23291	538 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	LCB1	P25045	558 aa	Known RBP	4.04	□□□□□ -1.76
CCL1	YPR025C	YCP4	P25349	247 aa	Known RBP	4.04	□□□□□ -1.76
CCL1	YPR025C	ASK1	P35734	292 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	AUR1	P36107	401 aa	Predicted RBP	4.04	□□□□□ -1.76
CCL1	YPR025C	YBL029W	P38201	376 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	GND1	P38720	489 aa	Known RBP	4.04	□□□□□ -1.76
CCL1	YPR025C	YNG2	P38806	282 aa	Known RBP	4.04	□□□□□ -1.76
CCL1	YPR025C	MDV1	P47025	714 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	SMC3	P47037	1230 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	RPS7B	P48164	190 aa	Known RBP	4.04	□□□□□ -1.76
CCL1	YPR025C	CAC2	Q04199	468 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	APL4	Q12028	832 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	HUA2	Q12134	243 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	YBR126W-A	Q8TGU7	68 aa		4.04	□□□□□ -1.76
CCL1	YPR025C	YPT1	P01123	206 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	CBP1	P07252	654 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	RPL42A	P0CX27	106 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	RPL42B	P0CX28	106 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	RPL19A	P0CX82	189 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	RPL19B	P0CX83	189 aa	Predicted RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	KRS1	P15180	591 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	AAC3	P18238	307 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	VMA16	P23968	213 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	PDB1	P32473	366 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	PAH1	P32567	862 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	YKL050C	P35736	922 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	RFC1	P38630	861 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	UIP3	P39547	235 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	NOP16	P40007	231 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	STR3	P53101	465 aa	Known RBP	4.03	□□□□□ -1.76
CCL1	YPR025C	SGF73	P53165	657 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	IZH1	Q03419	316 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	ARP10	Q04549	284 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	MCP2	Q06567	569 aa		4.03	□□□□□ -1.76
CCL1	YPR025C	CLB2	P24869	491 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	SNU114	P36048	1008 aa	Known RBP	4.02	□□□□□ -1.77
CCL1	YPR025C	STV1	P37296	890 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	MNN2	P38069	597 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	AGP2	P38090	596 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	DIA4	P38705	446 aa	Predicted RBP	4.02	□□□□□ -1.77
CCL1	YPR025C	HXT9	P40885	567 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	LYS20	P48570	428 aa	Known RBP	4.02	□□□□□ -1.77
CCL1	YPR025C	DIA3	P52290	468 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	DUO1	P53168	247 aa	Known RBP	4.02	□□□□□ -1.77
CCL1	YPR025C	MPS1	P54199	764 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	YMR178W	Q03219	274 aa	Known RBP	4.02	□□□□□ -1.77
CCL1	YPR025C	YKU80	Q04437	629 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	UTP21	Q06078	939 aa	Predicted RBP	4.02	□□□□□ -1.77
CCL1	YPR025C	UBX3	Q12229	455 aa		4.02	□□□□□ -1.77
CCL1	YPR025C	RPB8	P20436	146 aa		4.01	□□□□□ -1.77
CCL1	YPR025C	POL4	P25615	582 aa		4.01	□□□□□ -1.77
CCL1	YPR025C	ANS1	P38832	159 aa		4.01	□□□□□ -1.77
CCL1	YPR025C	YNL234W	P53857	426 aa		4.01	□□□□□ -1.77
CCL1	YPR025C	BOP3	P53958	396 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms