RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C IMP3P32899 183 aaPredicted RBP8.47□□□□□ -1.05
PUP1YOR157C CTF13P35203 478 aa8.47□□□□□ -1.05
PUP1YOR157C MRPL15P36523 253 aa8.47□□□□□ -1.05
PUP1YOR157C SAW1P39735 261 aa8.47□□□□□ -1.05
PUP1YOR157C NMA111P53920 997 aa8.47□□□□□ -1.05
PUP1YOR157C YBL029C-AQ3E756 94 aa8.47□□□□□ -1.05
PUP1YOR157C DBF4P32325 704 aa8.46□□□□□ -1.06
PUP1YOR157C DEF1P35732 738 aaKnown RBP8.46□□□□□ -1.06
PUP1YOR157C ECM2P38241 364 aaKnown RBP8.46□□□□□ -1.06
PUP1YOR157C ZRG17P53735 605 aa8.46□□□□□ -1.06
PUP1YOR157C CCE1Q03702 353 aa8.46□□□□□ -1.06
PUP1YOR157C YET2Q04210 160 aa8.46□□□□□ -1.06
PUP1YOR157C YLR287CQ05881 355 aa8.46□□□□□ -1.06
PUP1YOR157C THI7Q05998 598 aa8.46□□□□□ -1.06
PUP1YOR157C NRT1Q08485 598 aa8.46□□□□□ -1.06
PUP1YOR157C WSC3Q12215 556 aa8.46□□□□□ -1.06
PUP1YOR157C FUM1P08417 488 aaKnown RBP8.45□□□□□ -1.06
PUP1YOR157C PDR1P12383 1068 aa8.45□□□□□ -1.06
PUP1YOR157C SEC23P15303 768 aaKnown RBP8.45□□□□□ -1.06
PUP1YOR157C SLY1P22213 666 aa8.45□□□□□ -1.06
PUP1YOR157C NAM9P27929 486 aa8.45□□□□□ -1.06
PUP1YOR157C RAD5P32849 1169 aaPredicted RBP8.45□□□□□ -1.06
PUP1YOR157C YBP1P38315 674 aa8.45□□□□□ -1.06
PUP1YOR157C YIR014WP40570 242 aa8.45□□□□□ -1.06
PUP1YOR157C YFR020WP43600 232 aa8.45□□□□□ -1.06
PUP1YOR157C SGF73P53165 657 aa8.45□□□□□ -1.06
PUP1YOR157C FHN1P53279 174 aa8.45□□□□□ -1.06
PUP1YOR157C MDM30Q05930 598 aa8.45□□□□□ -1.06
PUP1YOR157C NHA1Q99271 985 aa8.45□□□□□ -1.06
PUP1YOR157C MDM35O60200 86 aa8.44□□□□□ -1.06
PUP1YOR157C RSC6P25632 483 aa8.44□□□□□ -1.06
PUP1YOR157C MEI5P32489 222 aa8.44□□□□□ -1.06
PUP1YOR157C LDB7P38210 180 aa8.44□□□□□ -1.06
PUP1YOR157C GIM4P40005 111 aaKnown RBP8.44□□□□□ -1.06
PUP1YOR157C HUA2Q12134 243 aa8.44□□□□□ -1.06
PUP1YOR157C LAG2Q92325 660 aa8.44□□□□□ -1.06
PUP1YOR157C HSH49Q99181 213 aaPredicted RBP8.44□□□□□ -1.06
PUP1YOR157C YPT1P01123 206 aaKnown RBP8.43□□□□□ -1.06
PUP1YOR157C SPS1P08458 490 aa8.43□□□□□ -1.06
PUP1YOR157C FUR1P18562 216 aaKnown RBP8.43□□□□□ -1.06
PUP1YOR157C MOH1P38191 138 aa8.43□□□□□ -1.06
PUP1YOR157C DIA4P38705 446 aaPredicted RBP8.43□□□□□ -1.06
PUP1YOR157C PMC1P38929 1173 aaPredicted RBP8.43□□□□□ -1.06
PUP1YOR157C SMC2P38989 1170 aaKnown RBP8.43□□□□□ -1.06
PUP1YOR157C SER3P40054 469 aa8.43□□□□□ -1.06
PUP1YOR157C SEC24P40482 926 aaKnown RBP8.43□□□□□ -1.06
PUP1YOR157C GTS1P40956 396 aa8.43□□□□□ -1.06
PUP1YOR157C IME4P41833 600 aa8.43□□□□□ -1.06
PUP1YOR157C YJL049WP47048 450 aa8.43□□□□□ -1.06
PUP1YOR157C RPC17P47076 161 aa8.43□□□□□ -1.06
PUP1YOR157C SYH1Q02875 849 aaKnown RBP8.43□□□□□ -1.06
PUP1YOR157C FDC1Q03034 503 aa8.43□□□□□ -1.06
PUP1YOR157C RLI1Q03195 608 aaKnown RBP8.43□□□□□ -1.06
PUP1YOR157C NGL3Q03210 505 aa8.43□□□□□ -1.06
PUP1YOR157C ATG16Q03818 150 aa8.43□□□□□ -1.06
PUP1YOR157C YDL218WQ07629 317 aa8.43□□□□□ -1.06
PUP1YOR157C TEN1Q07921 160 aa8.43□□□□□ -1.06
PUP1YOR157C RAX1Q08760 435 aa8.43□□□□□ -1.06
PUP1YOR157C YLL056CQ12177 298 aa8.43□□□□□ -1.06
PUP1YOR157C YOL107WQ12239 342 aa8.43□□□□□ -1.06
PUP1YOR157C RAD10P06838 210 aa8.42□□□□□ -1.06
PUP1YOR157C HIS2P38635 335 aa8.42□□□□□ -1.06
PUP1YOR157C BEM4P39011 633 aa8.42□□□□□ -1.06
PUP1YOR157C YMR124WP39523 943 aaKnown RBP8.42□□□□□ -1.06
PUP1YOR157C ALG8P40351 577 aa8.42□□□□□ -1.06
PUP1YOR157C GAT1P43574 510 aa8.42□□□□□ -1.06
PUP1YOR157C EFM6P53970 246 aa8.42□□□□□ -1.06
PUP1YOR157C MET14Q02196 202 aa8.42□□□□□ -1.06
PUP1YOR157C OSH6Q02201 448 aa8.42□□□□□ -1.06
PUP1YOR157C YDR338CQ05497 695 aa8.42□□□□□ -1.06
PUP1YOR157C SEM1O94742 89 aa8.41□□□□□ -1.06
PUP1YOR157C GAL7P08431 366 aa8.41□□□□□ -1.06
PUP1YOR157C SFC1P33303 322 aa8.41□□□□□ -1.06
PUP1YOR157C CAB3P36076 571 aa8.41□□□□□ -1.06
PUP1YOR157C UBA4P38820 440 aa8.41□□□□□ -1.06
PUP1YOR157C RTT107P38850 1070 aa8.41□□□□□ -1.06
PUP1YOR157C GPI16P38875 610 aa8.41□□□□□ -1.06
PUP1YOR157C MND2P40577 368 aa8.41□□□□□ -1.06
PUP1YOR157C HSV2P50079 448 aaPredicted RBP8.41□□□□□ -1.06
PUP1YOR157C ATF2P53296 535 aa8.41□□□□□ -1.06
PUP1YOR157C GAD1Q04792 585 aa8.41□□□□□ -1.06
PUP1YOR157C VTA1Q06263 330 aa8.41□□□□□ -1.06
PUP1YOR157C PRS5Q12265 496 aaKnown RBP8.41□□□□□ -1.06
PUP1YOR157C LDB17Q12342 491 aa8.41□□□□□ -1.06
PUP1YOR157C YLR111WQ12528 110 aa8.41□□□□□ -1.06
PUP1YOR157C SPO12P17123 173 aa8.4□□□□□ -1.06
PUP1YOR157C PRP2P20095 876 aaPredicted RBP8.4□□□□□ -1.06
PUP1YOR157C RPF2P36160 344 aaKnown RBP8.4□□□□□ -1.06
PUP1YOR157C RRT2P38332 387 aa8.4□□□□□ -1.06
PUP1YOR157C ARG2P40360 574 aa8.4□□□□□ -1.06
PUP1YOR157C JHD2P47156 728 aaPredicted RBP8.4□□□□□ -1.06
PUP1YOR157C VPS73P53142 486 aaKnown RBP8.4□□□□□ -1.06
PUP1YOR157C TRM12Q04235 462 aa8.4□□□□□ -1.06
PUP1YOR157C HRK1Q08732 759 aaKnown RBP8.4□□□□□ -1.06
PUP1YOR157C LEU9Q12166 604 aaKnown RBP8.4□□□□□ -1.06
PUP1YOR157C WTM2Q12206 467 aa8.4□□□□□ -1.06
PUP1YOR157C PNO1Q99216 274 aaKnown RBP8.4□□□□□ -1.06
PUP1YOR157C FAS1P07149 2051 aaKnown RBP8.4□□□□□ -1.06
PUP1YOR157C HOM3P10869 527 aa8.39□□□□□ -1.07
PUP1YOR157C CMP2P14747 604 aa8.39□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms