RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	YLL007C	Q07799	665 aa		4	□□□□□ -1.77
ATG2	YNL242W	WRS1	Q12109	432 aa	Known RBP	4	□□□□□ -1.77
ATG2	YNL242W	YRR1	Q12172	810 aa		4	□□□□□ -1.77
ATG2	YNL242W	PMA2	P19657	947 aa		4	□□□□□ -1.77
ATG2	YNL242W	CCA1	P21269	546 aa		4	□□□□□ -1.77
ATG2	YNL242W	CDC20	P26309	610 aa		4	□□□□□ -1.77
ATG2	YNL242W	MRS6	P32864	603 aa	Known RBP	4	□□□□□ -1.77
ATG2	YNL242W	STV1	P37296	890 aa		4	□□□□□ -1.77
ATG2	YNL242W	YRO2	P38079	344 aa		4	□□□□□ -1.77
ATG2	YNL242W	THO1	P40040	218 aa	Known RBP	4	□□□□□ -1.77
ATG2	YNL242W	OPT1	P40897	799 aa		4	□□□□□ -1.77
ATG2	YNL242W	YFL012W	P43580	148 aa		4	□□□□□ -1.77
ATG2	YNL242W	POL31	P46957	487 aa		4	□□□□□ -1.77
ATG2	YNL242W	RTA1	P53047	317 aa		4	□□□□□ -1.77
ATG2	YNL242W	YNL108C	P53929	270 aa		4	□□□□□ -1.77
ATG2	YNL242W	ARX1	Q03862	593 aa	Known RBP	4	□□□□□ -1.77
ATG2	YNL242W	FMP45	Q07651	309 aa		4	□□□□□ -1.77
ATG2	YNL242W	RGS2	Q99188	309 aa		4	□□□□□ -1.77
ATG2	YNL242W	BCY1	P07278	416 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	DSF1	P0CX08	502 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	YNR073C	P0CX09	502 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	HMG1	P12683	1054 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	GUT1	P32190	709 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	ASF2	P32448	525 aa	Predicted RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	BCK2	P33306	851 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	TOD6	P34219	525 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	UTP30	P36144	274 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
ATG2	YNL242W	ECM10	P39987	644 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	YJR061W	P40355	935 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	CWC23	P52868	283 aa	Predicted RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	YNL010W	P53981	241 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	YMR099C	Q03161	297 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	NGL2	Q03264	515 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	ENT4	Q07872	247 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	TY4B-H	P0C2J7	1802 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	TY4B-J	P47024	1803 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	LRG1	P35688	1017 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	YBL029W	P38201	376 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	EGD2	P38879	174 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	NPR2	P39923	615 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	JLP2	P40206	208 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	RBG2	P53295	368 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	COX20	Q04935	205 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	DUS4	Q06063	367 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	GPM3	Q12326	303 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	YDL206W	Q12424	762 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	ARP6	Q12509	438 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	UTP10	P42945	1769 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	YGL041W-A	P0C5N3	154 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	SFL1	P20134	766 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	PXA2	P34230	853 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	WHI3	P34761	661 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	MNN2	P38069	597 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	YPK3	P38070	525 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	RIM2	P38127	377 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	SDH8	P38345	138 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	HXT5	P38695	592 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	CKB2	P38930	258 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	IES5	P40060	125 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	ARC35	P53731	342 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	GPD1	Q00055	391 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	MTD1	Q02046	320 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	YML020W	Q03722	664 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	YMR160W	Q03823	816 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	HPT1	Q04178	221 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	PEX12	Q04370	399 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	SWA2	Q06677	668 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	MDM36	Q06820	579 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	STE2	D6VTK4	431 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	TRP3	P00937	484 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	TPK2	P06245	380 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	PHA2	P32452	334 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	UGA4	P32837	571 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	QNS1	P38795	714 aa	Known RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	YIL054W	P40524	105 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	FAF1	P40546	346 aa	Predicted RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	BRE2	P43132	505 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	ROG3	P43602	733 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
ATG2	YNL242W	YJR098C	P47139	656 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	KEL2	P50090	882 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	ATG31	Q12421	196 aa		3.99	□□□□□ -1.77
ATG2	YNL242W	DCP1	Q12517	231 aa	Predicted RBP	3.99	□□□□□ -1.77
ATG2	YNL242W	ATP2	P00830	511 aa	Known RBP	3.98	□□□□□ -1.77
ATG2	YNL242W	SRM1	P21827	482 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	PRE8	P23639	250 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	YCL068C	P25593	260 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	HSP30	P25619	332 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	URA10	P30402	227 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	ATP7	P30902	174 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	STE5	P32917	917 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	PGM1	P33401	570 aa	Known RBP	3.98	□□□□□ -1.77
ATG2	YNL242W	SCD5	P34758	872 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	CRP1	P38845	465 aa	Known RBP	3.98	□□□□□ -1.77
ATG2	YNL242W	ATG7	P38862	630 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	ARC1	P46672	376 aa	Known RBP	3.98	□□□□□ -1.77
ATG2	YNL242W	YNL033W	P53964	284 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	YNL019C	P53975	284 aa		3.98	□□□□□ -1.77
ATG2	YNL242W	TRS130	Q03660	1102 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 120.6 ms