RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C SYN8P31377 255 aa3.63□□□□□ -1.83
WHI3YNL197C ADE17P38009 592 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C IMD2P38697 523 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C MET18P40469 1032 aa3.63□□□□□ -1.83
WHI3YNL197C AXL1P40851 1208 aa3.63□□□□□ -1.83
WHI3YNL197C CTK2P46962 323 aa3.63□□□□□ -1.83
WHI3YNL197C RPS7BP48164 190 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C IMD3P50095 523 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C ZDS2P54786 942 aa3.63□□□□□ -1.83
WHI3YNL197C RPT6Q01939 405 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C PSR1Q07800 427 aa3.63□□□□□ -1.83
WHI3YNL197C SNU66Q12420 587 aaPredicted RBP3.63□□□□□ -1.83
WHI3YNL197C YJR112W-AQ3E743 109 aa3.63□□□□□ -1.83
WHI3YNL197C YOL159C-AQ3E769 90 aa3.63□□□□□ -1.83
WHI3YNL197C RPN13O13563 156 aa3.63□□□□□ -1.83
WHI3YNL197C FUR1P18562 216 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C KGD1P20967 1014 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C PEP3P27801 918 aa3.63□□□□□ -1.83
WHI3YNL197C QRI1P43123 477 aaKnown RBP3.63□□□□□ -1.83
WHI3YNL197C ROK1P45818 564 aaPredicted RBP3.63□□□□□ -1.83
WHI3YNL197C YMR155WQ03795 547 aa3.63□□□□□ -1.83
WHI3YNL197C HEM1P09950 548 aaPredicted RBP3.62□□□□□ -1.83
WHI3YNL197C HOM3P10869 527 aa3.62□□□□□ -1.83
WHI3YNL197C SNU114P36048 1008 aaKnown RBP3.62□□□□□ -1.83
WHI3YNL197C BYE1P36106 594 aa3.62□□□□□ -1.83
WHI3YNL197C DIA4P38705 446 aaPredicted RBP3.62□□□□□ -1.83
WHI3YNL197C UIP3P39547 235 aa3.62□□□□□ -1.83
WHI3YNL197C ASG1P40467 964 aa3.62□□□□□ -1.83
WHI3YNL197C PKP1P40530 394 aa3.62□□□□□ -1.83
WHI3YNL197C DPB11P47027 764 aaPredicted RBP3.62□□□□□ -1.83
WHI3YNL197C RSC1P53236 928 aa3.62□□□□□ -1.83
WHI3YNL197C YDR131CQ03899 556 aa3.62□□□□□ -1.83
WHI3YNL197C LUC7Q07508 261 aaPredicted RBP3.62□□□□□ -1.83
WHI3YNL197C INP53Q12271 1107 aa3.62□□□□□ -1.83
WHI3YNL197C PNS1Q12412 539 aa3.62□□□□□ -1.83
WHI3YNL197C ADE5,7P07244 802 aaKnown RBP3.62□□□□□ -1.83
WHI3YNL197C ILV2P07342 687 aaKnown RBP3.62□□□□□ -1.83
WHI3YNL197C YIH1P25637 258 aa3.62□□□□□ -1.83
WHI3YNL197C RPC34P32910 317 aa3.62□□□□□ -1.83
WHI3YNL197C SOF1P33750 489 aaKnown RBP3.62□□□□□ -1.83
WHI3YNL197C TIF3P34167 436 aaKnown RBP3.62□□□□□ -1.83
WHI3YNL197C LHS1P36016 881 aa3.62□□□□□ -1.83
WHI3YNL197C FTH1P38310 465 aa3.62□□□□□ -1.83
WHI3YNL197C MRX1P40050 688 aa3.62□□□□□ -1.83
WHI3YNL197C GPD2P41911 440 aaKnown RBP3.62□□□□□ -1.83
WHI3YNL197C MAK10Q02197 733 aa3.62□□□□□ -1.83
WHI3YNL197C RDL1Q12305 139 aaKnown RBP3.62□□□□□ -1.83
WHI3YNL197C YLR111WQ12528 110 aa3.62□□□□□ -1.83
WHI3YNL197C HXK2P04807 486 aaKnown RBP3.61□□□□□ -1.83
WHI3YNL197C DFR1P07807 211 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
WHI3YNL197C ADY2P25613 283 aa3.61□□□□□ -1.83
WHI3YNL197C AGP2P38090 596 aa3.61□□□□□ -1.83
WHI3YNL197C CST26P38226 397 aa3.61□□□□□ -1.83
WHI3YNL197C SMF1P38925 575 aa3.61□□□□□ -1.83
WHI3YNL197C BUR6P40096 142 aa3.61□□□□□ -1.83
WHI3YNL197C LTP1P40347 161 aa3.61□□□□□ -1.83
WHI3YNL197C YIL166CP40445 542 aa3.61□□□□□ -1.83
WHI3YNL197C CIN1P40987 1014 aa3.61□□□□□ -1.83
WHI3YNL197C APT1P49435 187 aaKnown RBP3.61□□□□□ -1.83
WHI3YNL197C IST1P53843 298 aaPredicted RBP3.61□□□□□ -1.83
WHI3YNL197C EFM6P53970 246 aa3.61□□□□□ -1.83
WHI3YNL197C AAT1Q01802 451 aa3.61□□□□□ -1.83
WHI3YNL197C VMA16P23968 213 aa3.6□□□□□ -1.83
WHI3YNL197C GPI10P30777 616 aa3.6□□□□□ -1.83
WHI3YNL197C WBP1P33767 430 aaKnown RBP3.6□□□□□ -1.83
WHI3YNL197C REG2P38232 338 aa3.6□□□□□ -1.83
WHI3YNL197C ARP1P38696 384 aa3.6□□□□□ -1.83
WHI3YNL197C ELO1P39540 310 aa3.6□□□□□ -1.83
WHI3YNL197C YJL043WP47053 257 aa3.6□□□□□ -1.83
WHI3YNL197C YGR066CP53242 292 aa3.6□□□□□ -1.83
WHI3YNL197C ECM22Q05958 814 aaPredicted RBP3.6□□□□□ -1.83
WHI3YNL197C MRD1Q06106 887 aaKnown RBP3.6□□□□□ -1.83
WHI3YNL197C YLR455WQ06188 304 aa3.6□□□□□ -1.83
WHI3YNL197C THI3Q07471 609 aa3.6□□□□□ -1.83
WHI3YNL197C ISN1Q99312 450 aa3.6□□□□□ -1.83
WHI3YNL197C GPA1P08539 472 aa3.6□□□□□ -1.83
WHI3YNL197C EST1P17214 699 aaPredicted RBP3.6□□□□□ -1.83
WHI3YNL197C PUP3P25451 205 aaKnown RBP3.6□□□□□ -1.83
WHI3YNL197C SSE2P32590 693 aaKnown RBP3.6□□□□□ -1.83
WHI3YNL197C VMA8P32610 256 aaKnown RBP3.6□□□□□ -1.83
WHI3YNL197C MAF1P41910 395 aa3.6□□□□□ -1.83
WHI3YNL197C HOS2P53096 452 aaPredicted RBP3.6□□□□□ -1.83
WHI3YNL197C EAF7P53911 425 aaKnown RBP3.6□□□□□ -1.83
WHI3YNL197C YLR345WQ06137 509 aa3.6□□□□□ -1.83
WHI3YNL197C ARO10Q06408 635 aa3.6□□□□□ -1.83
WHI3YNL197C YER145C-AA0A023PYF4 145 aa3.59□□□□□ -1.83
WHI3YNL197C PDX1P16451 410 aa3.59□□□□□ -1.83
WHI3YNL197C STE50P25344 346 aa3.59□□□□□ -1.83
WHI3YNL197C ADH7P25377 361 aa3.59□□□□□ -1.83
WHI3YNL197C TCD2P36101 447 aaKnown RBP3.59□□□□□ -1.83
WHI3YNL197C FLO10P36170 1169 aa3.59□□□□□ -1.83
WHI3YNL197C DOT5P40553 215 aa3.59□□□□□ -1.83
WHI3YNL197C DIA3P52290 468 aa3.59□□□□□ -1.83
WHI3YNL197C BUD22Q04347 519 aaKnown RBP3.59□□□□□ -1.83
WHI3YNL197C VPS38Q05919 439 aa3.59□□□□□ -1.83
WHI3YNL197C FMP40Q08968 688 aaPredicted RBP3.59□□□□□ -1.83
WHI3YNL197C RLM1Q12224 676 aa3.59□□□□□ -1.83
WHI3YNL197C MRP13P12686 339 aa3.58□□□□□ -1.84
WHI3YNL197C UBP11P36026 717 aa3.58□□□□□ -1.84
WHI3YNL197C RPS10BP46784 105 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms