RNA–Protein interactions for RNA: YMR017W

SPO20, Transcript of Meiosis-specific subunit of the t-SNARE complex, yeastyeast

Gene SPO20, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO20YMR017W YDR056CQ12025 205 aa4.74□□□□□ -1.65
SPO20YMR017W ATG9Q12142 997 aa4.74□□□□□ -1.65
SPO20YMR017W RGT2Q12300 763 aa4.74□□□□□ -1.65
SPO20YMR017W CDC16P09798 840 aa4.73□□□□□ -1.65
SPO20YMR017W AIM17P23180 465 aaKnown RBP4.73□□□□□ -1.65
SPO20YMR017W PRE8P23639 250 aa4.73□□□□□ -1.65
SPO20YMR017W SAC1P32368 623 aaKnown RBP4.73□□□□□ -1.65
SPO20YMR017W PAH1P32567 862 aa4.73□□□□□ -1.65
SPO20YMR017W SPC97P38863 823 aa4.73□□□□□ -1.65
SPO20YMR017W VPS25P47142 202 aa4.73□□□□□ -1.65
SPO20YMR017W GLO1P50107 326 aa4.73□□□□□ -1.65
SPO20YMR017W NNF2P53253 936 aa4.73□□□□□ -1.65
SPO20YMR017W YTP1P53584 459 aa4.73□□□□□ -1.65
SPO20YMR017W SUB1P54000 292 aaKnown RBP4.73□□□□□ -1.65
SPO20YMR017W CAC2Q04199 468 aa4.73□□□□□ -1.65
SPO20YMR017W PSR1Q07800 427 aa4.73□□□□□ -1.65
SPO20YMR017W GEP3Q08622 556 aa4.73□□□□□ -1.65
SPO20YMR017W ATX2Q12067 313 aa4.73□□□□□ -1.65
SPO20YMR017W INP53Q12271 1107 aa4.73□□□□□ -1.65
SPO20YMR017W RPL19AP0CX82 189 aaKnown RBP4.72□□□□□ -1.65
SPO20YMR017W RPL19BP0CX83 189 aaPredicted RBP4.72□□□□□ -1.65
SPO20YMR017W YCP4P25349 247 aaKnown RBP4.72□□□□□ -1.65
SPO20YMR017W PDB1P32473 366 aaKnown RBP4.72□□□□□ -1.65
SPO20YMR017W ASK1P35734 292 aa4.72□□□□□ -1.65
SPO20YMR017W GAT1P43574 510 aa4.72□□□□□ -1.65
SPO20YMR017W RPS7BP48164 190 aaKnown RBP4.72□□□□□ -1.65
SPO20YMR017W SCW4P53334 386 aaKnown RBP4.72□□□□□ -1.65
SPO20YMR017W MRPL1Q04599 285 aa4.72□□□□□ -1.65
SPO20YMR017W YOL159CQ08300 171 aa4.72□□□□□ -1.65
SPO20YMR017W YPT1P01123 206 aaKnown RBP4.71□□□□□ -1.66
SPO20YMR017W CLB2P24869 491 aa4.71□□□□□ -1.66
SPO20YMR017W GFD2P25370 566 aaKnown RBP4.71□□□□□ -1.66
SPO20YMR017W MGM1P32266 881 aa4.71□□□□□ -1.66
SPO20YMR017W SWE1P32944 819 aa4.71□□□□□ -1.66
SPO20YMR017W YNG2P38806 282 aaKnown RBP4.71□□□□□ -1.66
SPO20YMR017W RTS1P38903 757 aa4.71□□□□□ -1.66
SPO20YMR017W UIP3P39547 235 aa4.71□□□□□ -1.66
SPO20YMR017W BUR6P40096 142 aa4.71□□□□□ -1.66
SPO20YMR017W YIR016WP40572 265 aa4.71□□□□□ -1.66
SPO20YMR017W YKU80Q04437 629 aa4.71□□□□□ -1.66
SPO20YMR017W TCO89Q08921 799 aa4.71□□□□□ -1.66
SPO20YMR017W PWP1P21304 576 aaKnown RBP4.7□□□□□ -1.66
SPO20YMR017W SAN1P22470 610 aa4.7□□□□□ -1.66
SPO20YMR017W SNU114P36048 1008 aaKnown RBP4.7□□□□□ -1.66
SPO20YMR017W MAL33P38157 468 aa4.7□□□□□ -1.66
SPO20YMR017W RFC1P38630 861 aaKnown RBP4.7□□□□□ -1.66
SPO20YMR017W DIA4P38705 446 aaPredicted RBP4.7□□□□□ -1.66
SPO20YMR017W GND1P38720 489 aaKnown RBP4.7□□□□□ -1.66
SPO20YMR017W TMA108P40462 946 aa4.7□□□□□ -1.66
SPO20YMR017W SMC3P47037 1230 aa4.7□□□□□ -1.66
SPO20YMR017W YMR178WQ03219 274 aaKnown RBP4.7□□□□□ -1.66
SPO20YMR017W GSH2Q08220 491 aa4.7□□□□□ -1.66
SPO20YMR017W YLR112WQ12130 139 aa4.7□□□□□ -1.66
SPO20YMR017W ENT1Q12518 454 aa4.7□□□□□ -1.66
SPO20YMR017W KRS1P15180 591 aaKnown RBP4.69□□□□□ -1.66
SPO20YMR017W AAC3P18238 307 aa4.69□□□□□ -1.66
SPO20YMR017W VMA16P23968 213 aa4.69□□□□□ -1.66
SPO20YMR017W TMT1P32643 299 aa4.69□□□□□ -1.66
SPO20YMR017W YKL050CP35736 922 aa4.69□□□□□ -1.66
SPO20YMR017W NOP16P40007 231 aaKnown RBP4.69□□□□□ -1.66
SPO20YMR017W MDV1P47025 714 aa4.69□□□□□ -1.66
SPO20YMR017W LYS4P49367 693 aaPredicted RBP4.69□□□□□ -1.66
SPO20YMR017W SGF73P53165 657 aa4.69□□□□□ -1.66
SPO20YMR017W MCP2Q06567 569 aa4.69□□□□□ -1.66
SPO20YMR017W POS5Q06892 414 aa4.69□□□□□ -1.66
SPO20YMR017W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
SPO20YMR017W YBR126W-AQ8TGU7 68 aa4.69□□□□□ -1.66
SPO20YMR017W SEM1O94742 89 aa4.68□□□□□ -1.66
SPO20YMR017W RPL42AP0CX27 106 aaKnown RBP4.68□□□□□ -1.66
SPO20YMR017W RPL42BP0CX28 106 aaKnown RBP4.68□□□□□ -1.66
SPO20YMR017W LCB1P25045 558 aaKnown RBP4.68□□□□□ -1.66
SPO20YMR017W STV1P37296 890 aa4.68□□□□□ -1.66
SPO20YMR017W AGP2P38090 596 aa4.68□□□□□ -1.66
SPO20YMR017W YBL029WP38201 376 aa4.68□□□□□ -1.66
SPO20YMR017W VRG4P40107 337 aa4.68□□□□□ -1.66
SPO20YMR017W UPF3P48412 387 aaKnown RBP4.68□□□□□ -1.66
SPO20YMR017W DIA3P52290 468 aa4.68□□□□□ -1.66
SPO20YMR017W DUO1P53168 247 aaKnown RBP4.68□□□□□ -1.66
SPO20YMR017W SEC5P89102 971 aa4.68□□□□□ -1.66
SPO20YMR017W IZH1Q03419 316 aa4.68□□□□□ -1.66
SPO20YMR017W APL4Q12028 832 aa4.68□□□□□ -1.66
SPO20YMR017W ICT1Q12385 394 aa4.68□□□□□ -1.66
SPO20YMR017W KAR3P17119 729 aa4.67□□□□□ -1.66
SPO20YMR017W SPE2P21182 396 aa4.67□□□□□ -1.66
SPO20YMR017W YCK1P23291 538 aa4.67□□□□□ -1.66
SPO20YMR017W SAC6P32599 642 aaKnown RBP4.67□□□□□ -1.66
SPO20YMR017W MNN2P38069 597 aa4.67□□□□□ -1.66
SPO20YMR017W LYS20P48570 428 aaKnown RBP4.67□□□□□ -1.66
SPO20YMR017W STR3P53101 465 aaKnown RBP4.67□□□□□ -1.66
SPO20YMR017W MPS1P54199 764 aa4.67□□□□□ -1.66
SPO20YMR017W ARP10Q04549 284 aa4.67□□□□□ -1.66
SPO20YMR017W UTP21Q06078 939 aaPredicted RBP4.67□□□□□ -1.66
SPO20YMR017W HUA2Q12134 243 aa4.67□□□□□ -1.66
SPO20YMR017W EDE1P34216 1381 aa4.66□□□□□ -1.66
SPO20YMR017W ADH7P25377 361 aa4.66□□□□□ -1.66
SPO20YMR017W MIA40P36046 403 aa4.66□□□□□ -1.66
SPO20YMR017W AUR1P36107 401 aaPredicted RBP4.66□□□□□ -1.66
SPO20YMR017W LEU5P38702 357 aa4.66□□□□□ -1.66
SPO20YMR017W ZDS2P54786 942 aa4.66□□□□□ -1.66
SPO20YMR017W MAK10Q02197 733 aa4.66□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms