RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RSB1Q08417 382 aa3.89□□□□□ -1.79
USA1YML029W UBR1P19812 1950 aa3.89□□□□□ -1.79
USA1YML029W AI3P03877 415 aa3.89□□□□□ -1.79
USA1YML029W YKR104WP0CE69 306 aa3.89□□□□□ -1.79
USA1YML029W DCC1P25559 380 aa3.89□□□□□ -1.79
USA1YML029W BRF1P29056 596 aa3.89□□□□□ -1.79
USA1YML029W SQT1P35184 431 aa3.89□□□□□ -1.79
USA1YML029W MED6P38782 295 aa3.89□□□□□ -1.79
USA1YML029W PEX13P80667 386 aa3.89□□□□□ -1.79
USA1YML029W TAF11Q04226 346 aa3.89□□□□□ -1.79
USA1YML029W HEL2Q05580 639 aaKnown RBP3.89□□□□□ -1.79
USA1YML029W YOL019WQ08157 551 aa3.89□□□□□ -1.79
USA1YML029W PEX15Q08215 383 aa3.89□□□□□ -1.79
USA1YML029W SRO7Q12038 1033 aa3.89□□□□□ -1.79
USA1YML029W NCA2Q12374 616 aa3.89□□□□□ -1.79
USA1YML029W SRV2P17555 526 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W SNT1P25357 1226 aa3.88□□□□□ -1.79
USA1YML029W MF(ALPHA)2P32435 120 aa3.88□□□□□ -1.79
USA1YML029W ETR1P38071 380 aa3.88□□□□□ -1.79
USA1YML029W LDB7P38210 180 aa3.88□□□□□ -1.79
USA1YML029W LRP1P38801 184 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W BAT1P38891 393 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W VPS41P38959 992 aa3.88□□□□□ -1.79
USA1YML029W YJL107CP42947 387 aa3.88□□□□□ -1.79
USA1YML029W ARC1P46672 376 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W TRF5P48561 642 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W VEL1P53058 206 aa3.88□□□□□ -1.79
USA1YML029W YPL113CQ02961 396 aa3.88□□□□□ -1.79
USA1YML029W NHP10Q03435 203 aa3.88□□□□□ -1.79
USA1YML029W AGE1Q04412 482 aa3.88□□□□□ -1.79
USA1YML029W MFB1Q04922 465 aa3.88□□□□□ -1.79
USA1YML029W YML053CQ04978 212 aa3.88□□□□□ -1.79
USA1YML029W FAR8Q05040 523 aa3.88□□□□□ -1.79
USA1YML029W LDB17Q12342 491 aa3.88□□□□□ -1.79
USA1YML029W KCS1Q12494 1050 aa3.88□□□□□ -1.79
USA1YML029W TSC13Q99190 310 aa3.88□□□□□ -1.79
USA1YML029W ABF1P14164 731 aa3.88□□□□□ -1.79
USA1YML029W YCL068CP25593 260 aa3.88□□□□□ -1.79
USA1YML029W PHO11P35842 467 aa3.88□□□□□ -1.79
USA1YML029W IML3P38265 245 aa3.88□□□□□ -1.79
USA1YML029W PHO12P38693 467 aa3.88□□□□□ -1.79
USA1YML029W RPS26AP39938 119 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W RPS26BP39939 119 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W DSN1P40568 576 aa3.88□□□□□ -1.79
USA1YML029W YFL012WP43580 148 aa3.88□□□□□ -1.79
USA1YML029W TRS85P46944 698 aa3.88□□□□□ -1.79
USA1YML029W COQ5P49017 307 aa3.88□□□□□ -1.79
USA1YML029W ASN2P49090 572 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W ZRG17P53735 605 aa3.88□□□□□ -1.79
USA1YML029W CAF120P53836 1060 aa3.88□□□□□ -1.79
USA1YML029W TRS31Q03337 283 aa3.88□□□□□ -1.79
USA1YML029W YDR132CQ03900 495 aa3.88□□□□□ -1.79
USA1YML029W YET3Q07451 203 aa3.88□□□□□ -1.79
USA1YML029W SAM4Q08985 325 aaKnown RBP3.88□□□□□ -1.79
USA1YML029W YPR117WQ06116 2489 aa3.88□□□□□ -1.79
USA1YML029W CCH1P50077 2039 aa3.88□□□□□ -1.79
USA1YML029W SUC2P00724 532 aa3.87□□□□□ -1.79
USA1YML029W HTA1P04911 132 aaKnown RBP3.87□□□□□ -1.79
USA1YML029W HTA2P04912 132 aa3.87□□□□□ -1.79
USA1YML029W SSC1P0CS90 654 aaKnown RBP3.87□□□□□ -1.79
USA1YML029W YKL100CP34248 587 aa3.87□□□□□ -1.79
USA1YML029W ALY1P36117 915 aa3.87□□□□□ -1.79
USA1YML029W GIP1P38229 639 aa3.87□□□□□ -1.79
USA1YML029W MUM2P38236 366 aa3.87□□□□□ -1.79
USA1YML029W ACO2P39533 789 aa3.87□□□□□ -1.79
USA1YML029W YHB1P39676 399 aaKnown RBP3.87□□□□□ -1.79
USA1YML029W YER034WP40022 185 aaKnown RBP3.87□□□□□ -1.79
USA1YML029W GTS1P40956 396 aa3.87□□□□□ -1.79
USA1YML029W TIM13P53299 105 aa3.87□□□□□ -1.79
USA1YML029W BUD22Q04347 519 aaKnown RBP3.87□□□□□ -1.79
USA1YML029W YLR177WQ06251 628 aa3.87□□□□□ -1.79
USA1YML029W SYT1Q06836 1226 aa3.87□□□□□ -1.79
USA1YML029W OPI10Q08202 246 aa3.87□□□□□ -1.79
USA1YML029W SLD7Q08457 257 aa3.87□□□□□ -1.79
USA1YML029W COX3P00420 269 aa3.87□□□□□ -1.79
USA1YML029W SWI5P08153 709 aa3.87□□□□□ -1.79
USA1YML029W MCM1P11746 286 aa3.87□□□□□ -1.79
USA1YML029W SCD5P34758 872 aa3.87□□□□□ -1.79
USA1YML029W CCT8P47079 568 aaKnown RBP3.87□□□□□ -1.79
USA1YML029W MRS2Q01926 470 aa3.87□□□□□ -1.79
USA1YML029W VTA1Q06263 330 aa3.87□□□□□ -1.79
USA1YML029W YDL129WQ07555 291 aa3.87□□□□□ -1.79
USA1YML029W VPS68Q12016 184 aa3.87□□□□□ -1.79
USA1YML029W SLP1Q12232 587 aa3.87□□□□□ -1.79
USA1YML029W HSF1P10961 833 aa3.86□□□□□ -1.79
USA1YML029W EPT1P22140 391 aa3.86□□□□□ -1.79
USA1YML029W CDC10P25342 322 aaKnown RBP3.86□□□□□ -1.79
USA1YML029W MSB2P32334 1306 aa3.86□□□□□ -1.79
USA1YML029W TIP20P33891 701 aa3.86□□□□□ -1.79
USA1YML029W TFC3P34111 1160 aa3.86□□□□□ -1.79
USA1YML029W MRPL37P36532 105 aa3.86□□□□□ -1.79
USA1YML029W YBR032WP38223 100 aa3.86□□□□□ -1.79
USA1YML029W HSE1P38753 452 aa3.86□□□□□ -1.79
USA1YML029W MEF2P39677 819 aa3.86□□□□□ -1.79
USA1YML029W YJL049WP47048 450 aa3.86□□□□□ -1.79
USA1YML029W YGR250CP53316 781 aaKnown RBP3.86□□□□□ -1.79
USA1YML029W BIO4P53630 237 aa3.86□□□□□ -1.79
USA1YML029W IST1P53843 298 aaPredicted RBP3.86□□□□□ -1.79
USA1YML029W RRN11Q04712 507 aa3.86□□□□□ -1.79
USA1YML029W BUD20Q08004 166 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms