RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	CTK2	P46962	323 aa		3.57	□□□□□ -1.84
CST9	YLR394W	LYS4	P49367	693 aa	Predicted RBP	3.57	□□□□□ -1.84
CST9	YLR394W	YSA1	Q01976	231 aa		3.57	□□□□□ -1.84
CST9	YLR394W	FCP1	Q03254	732 aa		3.57	□□□□□ -1.84
CST9	YLR394W	NKP1	Q12493	238 aa		3.57	□□□□□ -1.84
CST9	YLR394W	RPL19A	P0CX82	189 aa	Known RBP	3.56	□□□□□ -1.84
CST9	YLR394W	RPL19B	P0CX83	189 aa	Predicted RBP	3.56	□□□□□ -1.84
CST9	YLR394W	KRS1	P15180	591 aa	Known RBP	3.56	□□□□□ -1.84
CST9	YLR394W	SOF1	P33750	489 aa	Known RBP	3.56	□□□□□ -1.84
CST9	YLR394W	LHS1	P36016	881 aa		3.56	□□□□□ -1.84
CST9	YLR394W	JHD1	P40034	492 aa		3.56	□□□□□ -1.84
CST9	YLR394W	LYS14	P40971	790 aa		3.56	□□□□□ -1.84
CST9	YLR394W	AAD10	P47182	288 aa		3.56	□□□□□ -1.84
CST9	YLR394W	MAK10	Q02197	733 aa		3.56	□□□□□ -1.84
CST9	YLR394W	INA17	Q02888	182 aa		3.56	□□□□□ -1.84
CST9	YLR394W	RIX7	Q07844	837 aa	Known RBP	3.56	□□□□□ -1.84
CST9	YLR394W	YCF1	P39109	1515 aa	Known RBP	3.56	□□□□□ -1.84
CST9	YLR394W	YBR085C-A	O43137	85 aa		3.55	□□□□□ -1.84
CST9	YLR394W	CDC16	P09798	840 aa		3.55	□□□□□ -1.84
CST9	YLR394W	KAR3	P17119	729 aa		3.55	□□□□□ -1.84
CST9	YLR394W	TKL1	P23254	680 aa	Known RBP	3.55	□□□□□ -1.84
CST9	YLR394W	YCP4	P25349	247 aa	Known RBP	3.55	□□□□□ -1.84
CST9	YLR394W	LEU5	P38702	357 aa		3.55	□□□□□ -1.84
CST9	YLR394W	MRX1	P40050	688 aa		3.55	□□□□□ -1.84
CST9	YLR394W	MNT3	P40549	630 aa		3.55	□□□□□ -1.84
CST9	YLR394W	UPF3	P48412	387 aa	Known RBP	3.55	□□□□□ -1.84
CST9	YLR394W	YTP1	P53584	459 aa		3.55	□□□□□ -1.84
CST9	YLR394W	PFA5	Q03289	374 aa		3.55	□□□□□ -1.84
CST9	YLR394W	RAD30	Q04049	632 aa		3.55	□□□□□ -1.84
CST9	YLR394W	YMR018W	Q04364	514 aa		3.55	□□□□□ -1.84
CST9	YLR394W	ECM22	Q05958	814 aa	Predicted RBP	3.55	□□□□□ -1.84
CST9	YLR394W	TAF2	P23255	1407 aa		3.55	□□□□□ -1.84
CST9	YLR394W	SAN1	P22470	610 aa		3.54	□□□□□ -1.84
CST9	YLR394W	AIM17	P23180	465 aa	Known RBP	3.54	□□□□□ -1.84
CST9	YLR394W	MNN2	P38069	597 aa		3.54	□□□□□ -1.84
CST9	YLR394W	GND1	P38720	489 aa	Known RBP	3.54	□□□□□ -1.84
CST9	YLR394W	HXT9	P40885	567 aa		3.54	□□□□□ -1.84
CST9	YLR394W	ARC1	P46672	376 aa	Known RBP	3.54	□□□□□ -1.84
CST9	YLR394W	IRC8	P47046	822 aa		3.54	□□□□□ -1.84
CST9	YLR394W	BSC5	P53755	489 aa		3.54	□□□□□ -1.84
CST9	YLR394W	CAC2	Q04199	468 aa		3.54	□□□□□ -1.84
CST9	YLR394W	YLR112W	Q12130	139 aa		3.54	□□□□□ -1.84
CST9	YLR394W	HER1	Q12276	1246 aa		3.54	□□□□□ -1.84
CST9	YLR394W	SKI3	P17883	1432 aa	Known RBP	3.54	□□□□□ -1.84
CST9	YLR394W	CHS3	P29465	1165 aa		3.53	□□□□□ -1.84
CST9	YLR394W	KTR3	P38130	404 aa	Predicted RBP	3.53	□□□□□ -1.84
CST9	YLR394W	TOM71	P38825	639 aa	Known RBP	3.53	□□□□□ -1.84
CST9	YLR394W	SKG3	Q06315	1026 aa		3.53	□□□□□ -1.84
CST9	YLR394W	YPL272C	Q08984	517 aa		3.53	□□□□□ -1.84
CST9	YLR394W	YLR049C	Q12110	428 aa		3.53	□□□□□ -1.84
CST9	YLR394W	YPR089W	O13585	888 aa		3.53	□□□□□ -1.85
CST9	YLR394W	AAC3	P18238	307 aa		3.53	□□□□□ -1.85
CST9	YLR394W	PWP1	P21304	576 aa	Known RBP	3.53	□□□□□ -1.85
CST9	YLR394W	CLB2	P24869	491 aa		3.53	□□□□□ -1.85
CST9	YLR394W	PAH1	P32567	862 aa		3.53	□□□□□ -1.85
CST9	YLR394W	RPS7B	P48164	190 aa	Known RBP	3.53	□□□□□ -1.85
CST9	YLR394W	YPT11	P48559	417 aa		3.53	□□□□□ -1.85
CST9	YLR394W	NGL3	Q03210	505 aa		3.53	□□□□□ -1.85
CST9	YLR394W	SWF1	Q04629	336 aa		3.53	□□□□□ -1.85
CST9	YLR394W	RTT109	Q07794	436 aa		3.53	□□□□□ -1.85
CST9	YLR394W	ATX2	Q12067	313 aa		3.53	□□□□□ -1.85
CST9	YLR394W	SPE4	Q12455	300 aa		3.53	□□□□□ -1.85
CST9	YLR394W	SKM1	Q12469	655 aa		3.53	□□□□□ -1.85
CST9	YLR394W	RPL42A	P0CX27	106 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	RPL42B	P0CX28	106 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	CDC24	P11433	854 aa	Predicted RBP	3.52	□□□□□ -1.85
CST9	YLR394W	YCK1	P23291	538 aa		3.52	□□□□□ -1.85
CST9	YLR394W	PDB1	P32473	366 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	SNU114	P36048	1008 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	MAL33	P38157	468 aa		3.52	□□□□□ -1.85
CST9	YLR394W	YMR124W	P39523	943 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	NOP16	P40007	231 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	BUR6	P40096	142 aa		3.52	□□□□□ -1.85
CST9	YLR394W	PKP1	P40530	394 aa		3.52	□□□□□ -1.85
CST9	YLR394W	DUO1	P53168	247 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	ZDS2	P54786	942 aa		3.52	□□□□□ -1.85
CST9	YLR394W	VTC3	Q02725	835 aa		3.52	□□□□□ -1.85
CST9	YLR394W	TMA64	Q04600	565 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	ADE13	Q05911	482 aa	Known RBP	3.52	□□□□□ -1.85
CST9	YLR394W	NBP2	Q12163	236 aa		3.52	□□□□□ -1.85
CST9	YLR394W	INP53	Q12271	1107 aa		3.52	□□□□□ -1.85
CST9	YLR394W	GFD2	P25370	566 aa	Known RBP	3.51	□□□□□ -1.85
CST9	YLR394W	CDC15	P27636	974 aa		3.51	□□□□□ -1.85
CST9	YLR394W	SAC1	P32368	623 aa	Known RBP	3.51	□□□□□ -1.85
CST9	YLR394W	YNG2	P38806	282 aa	Known RBP	3.51	□□□□□ -1.85
CST9	YLR394W	PCI8	P40512	444 aa		3.51	□□□□□ -1.85
CST9	YLR394W	DPB11	P47027	764 aa	Predicted RBP	3.51	□□□□□ -1.85
CST9	YLR394W	LYS20	P48570	428 aa	Known RBP	3.51	□□□□□ -1.85
CST9	YLR394W	STR3	P53101	465 aa	Known RBP	3.51	□□□□□ -1.85
CST9	YLR394W	SCW4	P53334	386 aa	Known RBP	3.51	□□□□□ -1.85
CST9	YLR394W	IST1	P53843	298 aa	Predicted RBP	3.51	□□□□□ -1.85
CST9	YLR394W	SSK2	P53599	1579 aa		3.51	□□□□□ -1.85
CST9	YLR394W	SEM1	O94742	89 aa		3.5	□□□□□ -1.85
CST9	YLR394W	HXK2	P04807	486 aa	Known RBP	3.5	□□□□□ -1.85
CST9	YLR394W	RAP1	P11938	827 aa		3.5	□□□□□ -1.85
CST9	YLR394W	KGD1	P20967	1014 aa	Known RBP	3.5	□□□□□ -1.85
CST9	YLR394W	PGS1	P25578	521 aa		3.5	□□□□□ -1.85
CST9	YLR394W	SYN8	P31377	255 aa		3.5	□□□□□ -1.85
CST9	YLR394W	MGM1	P32266	881 aa		3.5	□□□□□ -1.85
CST9	YLR394W	ASK1	P35734	292 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 66 ms