RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	YLR287C	Q05881	355 aa		5.82	□□□□□ -1.48
RSA3	YLR221C	IRC3	Q06683	689 aa		5.82	□□□□□ -1.48
RSA3	YLR221C	ILS1	P09436	1072 aa	Known RBP	5.81	□□□□□ -1.48
RSA3	YLR221C	TUB1	P09733	447 aa	Known RBP	5.81	□□□□□ -1.48
RSA3	YLR221C	CBS1	P14066	229 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	PWP1	P21304	576 aa	Known RBP	5.81	□□□□□ -1.48
RSA3	YLR221C	REG2	P38232	338 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	TAX4	P47030	604 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	SMC3	P47037	1230 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	ORC5	P50874	479 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	YPR003C	P53394	754 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	GIR2	Q03768	265 aa	Predicted RBP	5.81	□□□□□ -1.48
RSA3	YLR221C	YLR049C	Q12110	428 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	INP53	Q12271	1107 aa		5.81	□□□□□ -1.48
RSA3	YLR221C	FOB1	O13329	566 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	RIX1	P38883	763 aa	Predicted RBP	5.8	□□□□□ -1.48
RSA3	YLR221C	AFG3	P39925	761 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	RGI2	P40188	164 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	RPS7B	P48164	190 aa	Known RBP	5.8	□□□□□ -1.48
RSA3	YLR221C	LYS4	P49367	693 aa	Predicted RBP	5.8	□□□□□ -1.48
RSA3	YLR221C	DIA3	P52290	468 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	YGR066C	P53242	292 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	TAF11	Q04226	346 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	TPO3	Q06451	622 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	YEH1	Q07804	573 aa		5.8	□□□□□ -1.48
RSA3	YLR221C	HSH49	Q99181	213 aa	Predicted RBP	5.8	□□□□□ -1.48
RSA3	YLR221C	ARG3	P05150	338 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	PET111	P08468	800 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	CKA1	P15790	372 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	SPE2	P21182	396 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	YKL050C	P35736	922 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	IMD2	P38697	523 aa	Known RBP	5.79	□□□□□ -1.48
RSA3	YLR221C	CIN1	P40987	1014 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	VTC2	P43585	828 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	YFR020W	P43600	232 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	BPL1	P48445	690 aa	Predicted RBP	5.79	□□□□□ -1.48
RSA3	YLR221C	IMD3	P50095	523 aa	Known RBP	5.79	□□□□□ -1.48
RSA3	YLR221C	SNU56	Q03782	492 aa	Known RBP	5.79	□□□□□ -1.48
RSA3	YLR221C	ORM2	Q06144	216 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	SPE4	Q12455	300 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	YJR112W-A	Q3E743	109 aa		5.79	□□□□□ -1.48
RSA3	YLR221C	ARD1	P07347	238 aa	Predicted RBP	5.78	□□□□□ -1.48
RSA3	YLR221C	SNU114	P36048	1008 aa	Known RBP	5.78	□□□□□ -1.48
RSA3	YLR221C	ERV46	P39727	415 aa		5.78	□□□□□ -1.48
RSA3	YLR221C	SPO22	P40511	975 aa		5.78	□□□□□ -1.48
RSA3	YLR221C	CDC1	P40986	491 aa		5.78	□□□□□ -1.48
RSA3	YLR221C	SNM1	P40993	198 aa		5.78	□□□□□ -1.48
RSA3	YLR221C	VID30	P53076	958 aa		5.78	□□□□□ -1.48
RSA3	YLR221C	YLR455W	Q06188	304 aa		5.78	□□□□□ -1.48
RSA3	YLR221C	YPL272C	Q08984	517 aa		5.78	□□□□□ -1.48
RSA3	YLR221C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
RSA3	YLR221C	RAP1	P11938	827 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	RED1	P14291	827 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	FUR1	P18562	216 aa	Known RBP	5.77	□□□□□ -1.49
RSA3	YLR221C	NPL6	P32832	435 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	LCL3	P53153	274 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	ATP23	P53722	227 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	ZDS2	P54786	942 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	PFA5	Q03289	374 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	SYF1	Q04048	859 aa	Predicted RBP	5.77	□□□□□ -1.49
RSA3	YLR221C	FMP40	Q08968	688 aa	Predicted RBP	5.77	□□□□□ -1.49
RSA3	YLR221C	APL4	Q12028	832 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	ATG9	Q12142	997 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	SFI1	Q12369	946 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	YLR111W	Q12528	110 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	YPT6	Q99260	215 aa		5.77	□□□□□ -1.49
RSA3	YLR221C	MF(ALPHA)1	P01149	165 aa		5.76	□□□□□ -1.49
RSA3	YLR221C	LCB1	P25045	558 aa	Known RBP	5.76	□□□□□ -1.49
RSA3	YLR221C	OCT1	P35999	772 aa		5.76	□□□□□ -1.49
RSA3	YLR221C	FAR3	P46671	204 aa		5.76	□□□□□ -1.49
RSA3	YLR221C	NNF2	P53253	936 aa		5.76	□□□□□ -1.49
RSA3	YLR221C	YGR127W	P53275	312 aa		5.76	□□□□□ -1.49
RSA3	YLR221C	UTP21	Q06078	939 aa	Predicted RBP	5.76	□□□□□ -1.49
RSA3	YLR221C	PDR8	Q06149	701 aa		5.76	□□□□□ -1.49
RSA3	YLR221C	OSW1	Q08692	278 aa		5.76	□□□□□ -1.49
RSA3	YLR221C	YCR006C	P25350	157 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	SAC1	P32368	623 aa	Known RBP	5.75	□□□□□ -1.49
RSA3	YLR221C	ORC2	P32833	620 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	ARN1	P38731	627 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	CCT6	P39079	546 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	TPA1	P40032	644 aa	Known RBP	5.75	□□□□□ -1.49
RSA3	YLR221C	IRC7	P43623	340 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	IRC8	P47046	822 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	MAK10	Q02197	733 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	YMR178W	Q03219	274 aa	Known RBP	5.75	□□□□□ -1.49
RSA3	YLR221C	LUC7	Q07508	261 aa	Predicted RBP	5.75	□□□□□ -1.49
RSA3	YLR221C	MCH4	Q08268	501 aa		5.75	□□□□□ -1.49
RSA3	YLR221C	LEU9	Q12166	604 aa	Known RBP	5.75	□□□□□ -1.49
RSA3	YLR221C	MET17	P06106	444 aa		5.74	□□□□□ -1.49
RSA3	YLR221C	HOM2	P13663	365 aa	Known RBP	5.74	□□□□□ -1.49
RSA3	YLR221C	URE2	P23202	354 aa	Known RBP	5.74	□□□□□ -1.49
RSA3	YLR221C	SSE2	P32590	693 aa	Known RBP	5.74	□□□□□ -1.49
RSA3	YLR221C	FLO10	P36170	1169 aa		5.74	□□□□□ -1.49
RSA3	YLR221C	MNN2	P38069	597 aa		5.74	□□□□□ -1.49
RSA3	YLR221C	SRO77	P38163	1010 aa		5.74	□□□□□ -1.49
RSA3	YLR221C	MUM2	P38236	366 aa		5.74	□□□□□ -1.49
RSA3	YLR221C	EFM6	P53970	246 aa		5.74	□□□□□ -1.49
RSA3	YLR221C	ETT1	Q08421	412 aa	Known RBP	5.74	□□□□□ -1.49
RSA3	YLR221C	BUD7	Q08754	746 aa		5.74	□□□□□ -1.49
RSA3	YLR221C	GET3	Q12154	354 aa	Known RBP	5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms