RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C GAC1P28006 793 aa3.29□□□□□ -1.88
NYV1YLR093C TIF3P34167 436 aaKnown RBP3.29□□□□□ -1.88
NYV1YLR093C PHO90P39535 881 aa3.29□□□□□ -1.88
NYV1YLR093C YTP1P53584 459 aa3.29□□□□□ -1.88
NYV1YLR093C HCR1Q05775 265 aaKnown RBP3.29□□□□□ -1.88
NYV1YLR093C BUD21Q08492 214 aaPredicted RBP3.29□□□□□ -1.88
NYV1YLR093C PIF1P07271 859 aa3.28□□□□□ -1.88
NYV1YLR093C SST2P11972 698 aaKnown RBP3.28□□□□□ -1.88
NYV1YLR093C SOF1P33750 489 aaKnown RBP3.28□□□□□ -1.88
NYV1YLR093C NTR2P36118 322 aaPredicted RBP3.28□□□□□ -1.88
NYV1YLR093C APM3P38153 483 aa3.28□□□□□ -1.88
NYV1YLR093C SEC31P38968 1273 aaKnown RBP3.28□□□□□ -1.88
NYV1YLR093C RPT2P40327 437 aaKnown RBP3.28□□□□□ -1.88
NYV1YLR093C YIL161WP40449 235 aaKnown RBP3.28□□□□□ -1.88
NYV1YLR093C ERR3P42222 437 aa3.28□□□□□ -1.88
NYV1YLR093C TGL2P54857 326 aa3.28□□□□□ -1.88
NYV1YLR093C STP3Q05937 343 aa3.28□□□□□ -1.88
NYV1YLR093C BRE1Q07457 700 aaKnown RBP3.28□□□□□ -1.88
NYV1YLR093C ERG1P32476 496 aaKnown RBP3.27□□□□□ -1.89
NYV1YLR093C SPC34P36131 295 aa3.27□□□□□ -1.89
NYV1YLR093C ERG7P38604 731 aa3.27□□□□□ -1.89
NYV1YLR093C ECM10P39987 644 aa3.27□□□□□ -1.89
NYV1YLR093C YJL068CP40363 299 aa3.27□□□□□ -1.89
NYV1YLR093C YDL186WP48568 277 aa3.27□□□□□ -1.89
NYV1YLR093C NUP100Q02629 959 aa3.27□□□□□ -1.89
NYV1YLR093C VPS72Q03388 795 aa3.27□□□□□ -1.89
NYV1YLR093C TMA64Q04600 565 aaKnown RBP3.27□□□□□ -1.89
NYV1YLR093C CRN1Q06440 651 aa3.27□□□□□ -1.89
NYV1YLR093C YDL218WQ07629 317 aa3.27□□□□□ -1.89
NYV1YLR093C PWP2P25635 923 aaKnown RBP3.26□□□□□ -1.89
NYV1YLR093C SWH1P35845 1188 aa3.26□□□□□ -1.89
NYV1YLR093C VPS24P36095 224 aaKnown RBP3.26□□□□□ -1.89
NYV1YLR093C SPG5P42933 373 aa3.26□□□□□ -1.89
NYV1YLR093C YPI1P43587 155 aa3.26□□□□□ -1.89
NYV1YLR093C YLL056CQ12177 298 aa3.26□□□□□ -1.89
NYV1YLR093C TMA7Q3E764 64 aaKnown RBP3.26□□□□□ -1.89
NYV1YLR093C ATP4P05626 244 aa3.25□□□□□ -1.89
NYV1YLR093C MRPL4P36517 319 aa3.25□□□□□ -1.89
NYV1YLR093C ADD37Q03233 198 aa3.25□□□□□ -1.89
NYV1YLR093C TRS130Q03660 1102 aa3.25□□□□□ -1.89
NYV1YLR093C RRP6Q12149 733 aaKnown RBP3.25□□□□□ -1.89
NYV1YLR093C LDB16P25587 256 aa3.24□□□□□ -1.89
NYV1YLR093C MIA40P36046 403 aa3.24□□□□□ -1.89
NYV1YLR093C FUI1P38196 639 aa3.24□□□□□ -1.89
NYV1YLR093C NAB3P38996 802 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
NYV1YLR093C SPC72P39723 622 aa3.24□□□□□ -1.89
NYV1YLR093C YER130CP39959 443 aa3.24□□□□□ -1.89
NYV1YLR093C SWP82P43554 623 aa3.24□□□□□ -1.89
NYV1YLR093C YJL132WP47014 750 aa3.24□□□□□ -1.89
NYV1YLR093C YGL242CP53066 181 aa3.24□□□□□ -1.89
NYV1YLR093C RPM2Q02773 1202 aa3.24□□□□□ -1.89
NYV1YLR093C RSM28Q03430 361 aa3.24□□□□□ -1.89
NYV1YLR093C BSC6Q08280 497 aa3.24□□□□□ -1.89
NYV1YLR093C NUP120P35729 1037 aa3.23□□□□□ -1.89
NYV1YLR093C YBR138CP38277 524 aa3.23□□□□□ -1.89
NYV1YLR093C RRP3P38712 501 aaKnown RBP3.23□□□□□ -1.89
NYV1YLR093C YEL068CP39977 110 aa3.23□□□□□ -1.89
NYV1YLR093C IES5P40060 125 aa3.23□□□□□ -1.89
NYV1YLR093C MOT3P54785 490 aaKnown RBP3.23□□□□□ -1.89
NYV1YLR093C YEH2Q07950 538 aa3.23□□□□□ -1.89
NYV1YLR093C RPL15AP05748 204 aaKnown RBP3.22□□□□□ -1.89
NYV1YLR093C PHD1P36093 366 aa3.22□□□□□ -1.89
NYV1YLR093C YIL060WP40519 144 aa3.22□□□□□ -1.89
NYV1YLR093C PKP2P53170 491 aa3.22□□□□□ -1.89
NYV1YLR093C SVL3Q03088 825 aaKnown RBP3.22□□□□□ -1.89
NYV1YLR093C ATP2P00830 511 aaKnown RBP3.21□□□□□ -1.9
NYV1YLR093C GDH1P07262 454 aaKnown RBP3.21□□□□□ -1.9
NYV1YLR093C YJL213WP40896 331 aa3.21□□□□□ -1.9
NYV1YLR093C ASE1P50275 885 aa3.21□□□□□ -1.9
NYV1YLR093C COS10P52924 374 aa3.21□□□□□ -1.9
NYV1YLR093C IST1P53843 298 aaPredicted RBP3.21□□□□□ -1.9
NYV1YLR093C CSL4P53859 292 aaPredicted RBP3.21□□□□□ -1.9
NYV1YLR093C ERP1Q05359 219 aaKnown RBP3.21□□□□□ -1.9
NYV1YLR093C YDL121CQ07541 149 aa3.21□□□□□ -1.9
NYV1YLR093C ARP6Q12509 438 aa3.21□□□□□ -1.9
NYV1YLR093C MPD2Q99316 277 aa3.21□□□□□ -1.9
NYV1YLR093C TRX2P22803 104 aaKnown RBP3.2□□□□□ -1.9
NYV1YLR093C SRB5P32585 307 aa3.2□□□□□ -1.9
NYV1YLR093C YKL133CP36066 463 aa3.2□□□□□ -1.9
NYV1YLR093C YTA12P40341 825 aa3.2□□□□□ -1.9
NYV1YLR093C YFR020WP43600 232 aa3.2□□□□□ -1.9
NYV1YLR093C CTF18P49956 741 aa3.2□□□□□ -1.9
NYV1YLR093C YGR021WP53212 290 aa3.2□□□□□ -1.9
NYV1YLR093C TDA7P53882 636 aaPredicted RBP3.2□□□□□ -1.9
NYV1YLR093C ATG16Q03818 150 aa3.2□□□□□ -1.9
NYV1YLR093C VMS1Q04311 632 aaKnown RBP3.2□□□□□ -1.9
NYV1YLR093C CSR1Q06705 408 aaKnown RBP3.2□□□□□ -1.9
NYV1YLR093C MSS18P08593 268 aa3.19□□□□□ -1.9
NYV1YLR093C ACH1P32316 526 aa3.19□□□□□ -1.9
NYV1YLR093C TFC3P34111 1160 aa3.19□□□□□ -1.9
NYV1YLR093C AGP2P38090 596 aa3.19□□□□□ -1.9
NYV1YLR093C YBP1P38315 674 aa3.19□□□□□ -1.9
NYV1YLR093C RRT2P38332 387 aa3.19□□□□□ -1.9
NYV1YLR093C PCA1P38360 1216 aa3.19□□□□□ -1.9
NYV1YLR093C ARP1P38696 384 aa3.19□□□□□ -1.9
NYV1YLR093C PUG1P40100 303 aa3.19□□□□□ -1.9
NYV1YLR093C PKP1P40530 394 aa3.19□□□□□ -1.9
NYV1YLR093C SMC3P47037 1230 aa3.19□□□□□ -1.9
NYV1YLR093C IKS1P47042 667 aa3.19□□□□□ -1.9
NYV1YLR093C SOL4P53315 255 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms